Neomonachus schauinslandi (Hawaiian monk seal): 110592922
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Entry
110592922 CDS
T08474
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03440
Homologous recombination
nsu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110592922 (BRIP1)
03460 Fanconi anemia pathway
110592922 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsu03400
]
110592922 (BRIP1)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110592922 (BRIP1)
DNA repair and recombination proteins [BR:
nsu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110592922 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
110592922 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
RLL
DEAD
ResIII
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
110592922
NCBI-ProteinID:
XP_044777759
UniProt:
A0A8M1MZ98
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Position
15:complement(25653203..25820714)
Genome browser
AA seq
1314 aa
AA seq
DB search
MSSVWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCSA
LAWQQSLSGKPVDESLNKKAEVPSSCCCVCHSKNFTNIDLNQGTSHHFNGPSTPPSERND
TSSTCQGFVWTCFQLFQIQDRQEAIDWLLGLAVRLEYGDNAEKYKDLVPDNTKNADNAAK
NAEPLINLDVNNPDFKAGVMALANLLQIQHHDDYLVMLKAIRILVQEHLTQDAVAKANQT
KEGLPVALDKHILGFDTGDAVLNEAAQILLCKFKGQNQKENIPLKDKPDSLLAGEILNGR
YGVKNRFKPPGHCSRCCCSTKQGSSQDSSNTTKKDHGGKSKIPKIYFGTRTHKQIAQITR
ELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRKEKCMELLDGKNGTSCYFYHGVHKISD
QHTLQTLQGMCKAWDIEELVSLGKKLKACPYYTARELIEDAHIIFCPYNYLLDAQIRESM
DINLKEEIVILDEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNIRKKDHEPLRAV
CYSLINWLEANSEHLMERDYESSCKIWSGSEMLLNLHKMGITTATFPILQGHFSAVLQKE
EKVLPMHGKEEARVVPIISASTQIMLKGLFMVFDYLFRQNSRFADDYKVAIQQTYSWINQ
IDTSDKNGFFALAKNKKRSRQKIAVHVLNFWCLNPAVAFSDINGKVWTIVLTSGTLSPMK
SFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLCATFQHTETFEFQDEVGELLL
SVCQTVSQGILCFLPSYKLLEKLKERWLYTGLWHNLELVKTVIVEPQGGEKTDFDELLQV
YYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYN
DQHSKLRGLLPGRQWYDIQAYRALNQALGRCIRHRNDWGALILVDDRFRSNPSRYISGLS
KWVRQQIQHHSTFESALESLAEFSKKHQKVIDVSKEDRKFIQDSESTLEVTHLKDNSLTY
LSEAASHLAPENPGKGEAKMCVQEQQCPKITKSPSLPRGIISRKERDDPVLLEESAQAVK
AEKIVISRSTSPTFNKQTKRASWSSFNSLGHCLTGEILTAAPKFRSPEDYTSSVSTFKTE
KGCKTVLPLVDKCESSSLTVNASFGPCPQSESTISSIKIDSNLLKRNDSKQLFCCEEALD
PDTELSLVGEEAELPTSHRASETEAEDESIYFSPELYDPMDTNEEKNDLVESDRDNRLAN
HSNCILVEDLFEISTMKGVDSVQEMKAEDCTDTKLNRLMHIKESKIDTIGSNVM
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtttggtctgaatatacaattggtggggtgaagattacctttccttataaa
gcctacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaagcaa
cattgtttgttggagagcccaacaggaagtgggaaaagcttagccttactttgttctgct
ttagcatggcaacagtctcttagtgggaagccagtggatgaaagcttaaataaaaaagct
gaagtaccatcatcatgttgttgtgtatgccattcaaagaattttacaaacattgacttg
aaccaaggaacttcacatcatttcaacggtccaagtacaccaccttctgaaagaaatgac
acttcatcaacttgtcaaggttttgtgtggacatgttttcagctcttccagattcaagat
cgacaagaagcaattgactggcttcttggtttagctgttagacttgaatatggagataat
gctgaaaaatacaaggacttggtacctgataatacaaaaaatgctgacaatgcagctaaa
aatgcagagccattgatcaacttggatgtaaataatcctgattttaaggctggtgtaatg
gctttggctaaccttcttcagattcagcatcatgatgattacctggtaatgcttaaggca
attcgcattttggtccaggagcacctgacccaggatgcagttgctaaagcaaatcaaacg
aaagagggcttgcctgttgctttagacaaacatattcttggttttgacacaggagatgca
gttcttaatgaagctgctcaaattcttctctgtaaattcaaaggtcaaaatcaaaaggaa
aatatccctttgaaagacaaacctgatagcttgttagcaggagaaatacttaatggaaga
tatggagtgaaaaacagatttaagccccctggtcactgttccaggtgttgttgttctact
aaacaaggaagcagtcaagattcctcaaataccactaaaaaggatcatggggggaaatcc
aagatacccaaaatatattttgggacacgcacacacaaacagatagctcagattactaga
gagctccggaggacagcgtactcaggggtcccaatgactattctttccagcagggatcat
acttgtgtccatcctgaagtagtaggtaacttcaacagaaaggaaaagtgcatggaattg
ctggatggaaaaaacggcacatcctgctatttttatcatggtgtacataaaattagtgat
caacacacattacagactcttcaaggaatgtgcaaagcctgggatatagaagaacttgtc
agcttgggaaaaaaactaaaggcatgtccatattacacagcacgagaactaatagaagat
gctcacataatattttgtccttacaactatcttctagatgcacaaataagggaaagtatg
gatatcaatctaaaagaagagattgtcattttagatgaagctcataacattgaagactgt
gctcgggagtcagcaagttacagtgtaacagaagttcagcttcggtttgctcgagatgaa
ctagatagtatggtcaataataatataaggaagaaagaccatgaacctctgcgagctgtg
tgctatagcctaattaattggttagaagcaaactctgaacatcttatggaaagggattat
gaatcatcctgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaaatgggc
atcaccactgctacttttcccattttgcagggacatttttctgctgtccttcaaaaagaa
gaaaaagtcttaccaatgcatggtaaagaggaggcaagagtagtaccaattattagtgct
tcaactcaaataatgctcaaaggactttttatggtgtttgactatctttttaggcaaaat
agcagatttgccgatgattataaagttgctattcaacagacttattcttggataaatcag
attgatacttcagataaaaatggattctttgctctggcaaaaaataagaaacgttcaaga
cagaaaattgcagttcatgtgctaaacttttggtgcttaaatccagctgtggccttttca
gatattaatggcaaagtttggacaattgttttgacatctgggacattatcaccaatgaaa
tccttctcatcagaacttggtgttacattcactatccaactggaggctaatcatgtcatt
aataactcacaggtttgggtgggcaccattgggtcaggccccaagggtcggaatctctgt
gctaccttccagcacacagaaacatttgagtttcaggatgaagtgggcgaacttttgtta
tctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaagttatta
gaaaagttaaaagaacgttggctctacactggtttatggcataatctagagttggtgaag
acagtcatcgtagaacctcagggaggagaaaaaactgattttgatgaattactgcaggtg
tactatgatgcaatcaagtacaaaggagagaaagatggagccctcttggtagcagtttgt
cgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgctgtcataaca
atagggattccttttccaaacgtgaaagatctacaggttgaactaaagcgacaatacaat
gatcagcactcaaaattgagaggtcttttacctggtcgtcagtggtatgatattcaagca
tatagggccttaaaccaggccctaggtaggtgtattcgacacagaaatgattggggagct
cttattctagtggatgatcgtttcaggagtaatcccagtcgatatatatctggactttct
aaatgggtacggcagcagattcagcaccattcaacatttgaaagtgcactggagtccttg
gctgaattttccaaaaaacaccagaaggtcattgatgtatccaaagaggacagaaagttt
atacaggacagtgagtctacacttgaagtgacccatttgaaggacaatagtttaacttat
ttatcagaagcggcaagtcatctagcaccagaaaatcctgggaaaggtgaagcaaaaatg
tgtgtccaagaacaacagtgtcctaaaataactaaaagtccatctctaccaagaggtatc
atctccagaaaggaaagagatgatcctgtattattggaagagtccgcccaggcagtgaaa
gcagaaaaaattgtgatttccaggtccacaagcccaaccttcaacaaacagacaaagaga
gctagctggtctagctttaattctttgggacattgtcttactggtgaaattctgactgca
gcacctaagttcaggtcaccagaggactatacctctagtgtctccactttcaaaacagaa
aagggatgtaaaacagttttgccactcgttgataaatgtgagtcctcatctctgacagta
aacgcatcatttggaccatgccctcaatcagaaagcactatttcttcaataaagattgat
tctaatcttcttaaaagaaatgattccaaacagctgttctgctgtgaagaagccctggat
ccggacactgaattgtctctagttggtgaagaagctgaacttcccacttcacatagagct
tctgaaacagaagcagaggatgaatctatctatttttcacctgagctttatgatcctatg
gatacaaatgaagaaaagaatgatctagttgaaagtgatagagacaatagattggctaat
cattcaaattgcattttagttgaagatctttttgaaattagtactatgaaaggagtggat
tcagtccaagaaatgaaagctgaggattgcacagacacaaagttgaatagactcatgcat
attaaagaaagtaaaatcgataccattggtagtaatgtaatgtaa
DBGET
integrated database retrieval system
