Neomonachus schauinslandi (Hawaiian monk seal): 110593255
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Entry
110593255 CDS
T08474
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8 isoform X1
KO
K12856
pre-mRNA-processing factor 8
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110593255 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110593255 (PRPF8)
Spliceosome [BR:
nsu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110593255 (PRPF8)
Complex C
U5 SnRNP specific factors
110593255 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
110593255
NCBI-ProteinID:
XP_021560175
UniProt:
A0A2Y9I8X4
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All DBs
Position
15:14806333..14841930
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcccca
ttgccagattacatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcaatta
caggccaagcgctatgcggaaaagcggaagtttggatttgtggatgctcagaaggaagac
atgcctccagaacatgttagaaagatcatccgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtctacttgggtgccctcaagtacatgccgcatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggacgtgcctgtgctgtac
cacatcactggagccatttcttttgtcaatgagattccctgggtcattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aacatcctagatgttgaacccctggaggccattcagctagagttggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagccattgagggatagccggaagtatgtg
aatggctccacttaccagcgctggcaattcacactgcccatgatgtccactctctaccgc
ctggccaatcagctcctgacagacttggtagatgacaactacttctatctgtttgatcta
aaggccttctttacctccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaatctccaggatgaagactggaatgaattcaatgatattaac
aagattatcatccggcagcctatccgcactgaatacaagatcgcttttccttacctgtac
aacaatcttccacaccatgtccacctcacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcccgatctcccagctttctactttgatcctttgatcaacccaatttct
cacaggcactccgtcaagagccaggaacccttgcctgatgatgatgaggagtttgagctc
ccagagtttgtggagcccttcctgaaggacacacccctctacacagacaatacagccaat
ggtattgccctgctctgggccccacggcccttcaacctacgctctggtcgcacgcgccgg
gccctggacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcataccagaaactgctgaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccaaaagaagaggtacctgtttcgctccttcaaagccaccaaa
ttctttcagtccacgaagctggactgggtggaggtggggctgcaggtttgccgccagggc
tacaacatgctcaaccttctcattcaccgtaaaaacctcaactatctgcacctggattac
aacttcaatcttaaacctgtcaagaccctcaccaccaaggaaagaaagaaatctcgtttc
gggaatgctttccatctgtgtcgagaagttctgcgtttaactaagctggtggtggacagt
cacgtgcagtatcgattgggcaatgtggatgccttccagctggcggatgggttgcagtat
atctttgctcacgtggggcagctgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggtcct
gtagggaagggccctggctgtggcttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgctggagcggtggctgggcaacctccttgcccgacagttt
gaaggccgacactctaagggggtggcaaagactgttacaaagcagcgagtggagtctcat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgaggga
atcaaacagaacaaggcccggacaatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaacattccctggaaggtacctgggctgccaacacccatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggaccaacactgcccactacaaccgagaacgg
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctgggccgcctcact
cggctgtatctgaaggcagaacaggagcgacagcacaactacctaaaggatgggccgtac
atcacagcggaggaagcggtggccgtgtataccaccactgtgcattggttggagagccgg
aggttctcacccatcccattccccccactctcctacaagcatgacaccaagttgctcatc
ttggccttggagcggcttaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaggagctaggtctgatcgagcaagcctatgacaacccccatgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctatagccacctggtgcccgtgtatgacgtggagccgctggagaaaatcactgatgcc
tacctggaccagtacctttggtatgaagctgacaagcgccgccttttcccaccttggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcattaat
aatctgcaggacgtgtgggagacaagtgagggtgagtgcaatgtcatgctggaatcacgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaataggctgttgcgactcatc
gtagaccacaacatagctgactacatgacagccaagaacaatgtcgtcatcaactataag
gacatgaaccatacaaattcctatgggatcattagaggcctgcagtttgcctcattcatc
gtgcagtactatggcttggtgatggatctactggtattgggactgcaccgggccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcccaccccatccgtctcttctgcagatacattgatcgtatccacattttcttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcatcctgacccc
aacaatgaaaatatcgttggctataataataagaagtgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ctgccacggtcagtgactacagttcagtgggagaacagcttcgtgtccgtgtacagtaag
gacaaccccaacctgctcttcaacatgtgtggctttgagtgccgcatcctacctaaatgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctacagaatgaggtt
actaaggagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctctaccaccttcaccaagattgtg
aataagtggaacacagctcttataggccttatgacatactttcgggaggcggtggtgaac
acccaggagctcctggacttgctagtgaagtgtgagaataagatccagacacgtatcaag
attggcctcaactccaagatgcccagtcggttccctcctgttgtgttctatacccctaag
gagttgggtggactcggcatgctctcaatgggccatgtgctcatcccccagtctgacctc
aggtggtccaaacagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttataccgctacatacagccatgggagagcgagttcatt
gattctcagcgggtctgggctgagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatctagaagattcatgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcatacgttggcttatgataagggctggcgtgttcgaact
gactttaagcagtaccaggttttgaagcagaaccctttctggtggacacatcagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgatccaggccctgggtggt
gtggaaggcatactggaacacacactcttcaagggcacttacttccctacctgggagggg
cttttctgggaaaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaacgtatatgtaggctttcaggtgcagctggacctgacgggtatc
ttcatgcatggcaagatccccacactgaagatctctcttatccagatcttccgagctcac
ttatggcagaagatccacgagagcattgtgatggacttgtgccaggtgtttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagacaatacacccgcggaagtcctat
aagatgaattcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctct
cggccctcattgcttgccgactccaaggatgtgatggatagtaccactactcagaagtat
tggattgatatccagttgcgctggggggactatgattcccatgacattgaacgctacgcc
cgggccaagttcctggactacaccacagacaacatgagtatctacccttcgcccactggt
gtgctcattgccattgacctggcatataatcttcacagtgcctatggaaactggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgcaagggcctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaattatggtgagctcttctccaaccagattatctggtttgtg
gatgacactaatgtctacagagtgactatccacaagacctttgaagggaacttgaccacc
aaacccatcaacggggccatcttcatcttcaatccacgcacagggcagctgttcctcaag
ataatccacacatctgtgtgggctggacagaagcgtttggggcagttggctaaatggaag
acagctgaggaagtggctgccctcatccgatctctgcctgtggaggagcagcccaagcag
atcattgtcaccaggaagggcatgctggacccattggaggtgcacttgctagactttccc
aatattgtgatcaaaggatcagagctccagctacctttccaggcttgtctcaaggtggaa
aagtttggggacctcatccttaaagccactgaaccccagatggttctctttaatctctac
gatgactggctcaagactatctcatcctacacggctttctcccgcctcatcctgattctg
cgtgccctgcatgtgaacaatgaccgcgcgaaggtgatcctgaagccagacaagactact
attacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctaaaagatcttatcttggctgactacggcaagaaaaacaatgtgaatgtggca
tcactgacacagtcggaaattcgagacatcattctgggtatggagatctcggcaccctca
cagcagcggcagcagatagcagagattgagaagcagaccaaggagcagtctcagctgaca
gcaacacagactcgtactgtcaacaagcatggcgatgagatcattacttctaccaccagc
aactatgagacccagactttctcctctaagactgaatggagggttagggccatctctgct
gccaaccttcacctaaggaccaatcatatctatgtttcatctgatgacatcaaggagacc
ggttatacctatatccttcccaagaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccaaattgcaggatacctgtatggggtgagcccaccagataacccccaggtgaag
gagatccgctgcattgtgatggtaccacagtggggcactcaccaaaccgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggagcccttaggatggatccacact
cagcccaatgaatcaccccagctgtcaccccaagatgtcaccacccatgctaagatcatg
gctgacaacccatcttgggatggtgagaagaccattatcatcacctgcagcttcacgcca
ggctcctgcacactgacagcctataagctgacccccagtggctatgagtggggtcgccag
aacacagacaagggcaacaatcccaagggctatctaccctcacattatgaaagggtccag
atgctgttgtcagaccgcttccttggcttttttatggttcctgcccagtcctcctggaac
tacaactttatgggtgtccggcacgatcccaacatgaagtatgagctgcagctggcaaat
cctaaagagttctaccacgaggtgcacagaccttcccacttcctcaacttcgctctcctg
caagagggtgaggtctactctgcggaccgagaagacctctatgcctaa
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integrated database retrieval system
