Neomonachus schauinslandi (Hawaiian monk seal): 110593493
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Entry
110593493 CDS
T08474
Symbol
CNTN1
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1
KO
K06759
contactin 1
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110593493 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110593493 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nsu00537
]
110593493 (CNTN1)
Cell adhesion molecules [BR:
nsu04515
]
Immunoglobulin superfamily
Contactins
110593493 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
nsu00537
]
Others
110593493 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_2
Ig_J_second
Interfer-bind
Big_3_4
ChitinaseA_N
Motif
Other DBs
NCBI-GeneID:
110593493
NCBI-ProteinID:
XP_044771144
UniProt:
A0A8M1MJT7
LinkDB
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Position
5:complement(70977274..71120709)
Genome browser
AA seq
1010 aa
AA seq
DB search
MWLLVSHLVIVSFTTCLSEFTWYRRYGHGVSEEDKGFGPIFEEQPINTIYPEESPEGKVS
LNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQKDAGIYYCLASNNYGM
VRSTEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFIT
MDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPLPERTTKPYPA
DIVVQFKDIYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTAEISTSGAVLKIFNIQL
EDEGTYECEAENNRGKDKYQARIYVQAFPEWVEHINDTEVDIGSDLYWPCVATGKPIPTI
RWLKNGYAYHKGELRLYDVTFDNAGMYQCIAENTHGAIYANAELKILALAPTFEMNPMKK
KILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSRILIWEDGSLEINNITRNDGGIY
TCFAENNRGRANNTGTLVITDPTRIILAPINADITVGENATMQCAASFDPALDLTFIWSF
NGYVIDFNKENIHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVDNSSASADLVVRG
PPGPPGGLRIEDIRATSVALTWSRGSDNHSPISKYTIQTKTILSDDWKDAKTDPPIIEGN
MEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAPSDVGGGGGENRE
LTITWVPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDTGRYVHKDETMRPSTAFQV
KVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVVEKIVESYQI
RYWAAHDKEAAAHRVQVTSQEYSARLENLLPDTQYFVEVRACNSAGCGPPSDMIETFTKK
APPSQPPRIISSVRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQHDGKLYSTHKHSI
EVPIPRDGEYVVEVRAHSDGGDGVVSQVKISVLNRQQISWSNQERLLRAF
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgcttgtcagtcaccttgtgatagtatcttttacaacttgtttatcagagttt
acatggtacagaagatatggtcacggagtttctgaggaagataaaggatttggaccaatt
tttgaagagcagccaatcaataccatttatccagaggaatcaccagaaggaaaagtttca
ctaaactgtagggcacgagccagccctttcccagtttacaaatggagaatgaataatggg
gatattgatctgacaagtgatcggtacagtatggtaggtggaaaccttgttatcaacaac
cctgacaaacagaaagatgctggaatatattactgcttagcatcaaataactatgggatg
gtcagaagcacggaagcaaccctgagctttggatatcttgaccctttcccacctgaggag
cgtcctgaggtcagggtgaaagaagggaagggaatggtgcttctctgtgatcctccatac
cattttccagatgatcttagctaccgctggcttctaaatgaatttcctgtatttatcaca
atggataaacgaagatttgtgtctcagacaaatggaaatctctacattgcaaatgtcgag
gcatcagacaaaggcaattattcctgctttgtatccagtccttctattacaaagagtgtg
ttcagcaaatttatcccactcattccactacctgaacgaacaacaaaaccatatcctgct
gatatcgtagttcagttcaaggacatatatgcactgatgggccaaaatgtgacgttagag
tgtttcgcacttggcaatcctgttcctgatatccgatggcggaaggtcctagaaccaatg
ccaagtactgctgagatcagcacctctggggctgtcctcaagatcttcaatattcagcta
gaagatgaaggcacatatgaatgtgaggctgagaacaatagaggaaaggataaataccag
gcaagaatttatgttcaagcatttcctgagtgggtagaacatatcaatgacacagaggtg
gatataggcagtgatctctattggccttgtgtggccacagggaagcccatccccacaatc
cgatggctgaaaaatggatatgcgtatcataaaggggaattgagactgtatgatgtgact
tttgacaatgccggcatgtaccagtgcatagctgaaaacacacatggagccatttatgca
aatgccgagttgaagatcttggctttggctccaacttttgaaatgaatcctatgaagaaa
aagatcttggctgctaaaggaggaagggtcataattgaatgcaaacctaaagcagcacct
aaaccaaaattttcatggagtaaaggaacagagtggcttgtcaatagcagcagaatactc
atttgggaagatggcagcttggaaataaataacatcacaaggaatgatggcggtatctat
acatgctttgcagaaaataatagagggagggctaataacactggcactcttgttattaca
gatcccacccgaattatattggccccaattaatgctgacattactgttggagaaaatgcc
accatgcagtgtgctgcttcctttgatcccgccctggatctcacatttatttggtccttc
aatggctatgtgatcgattttaacaaagagaacattcattaccagcggaattttatgctg
gattccaatggggaactgcttatccgaaatgcccagctgaagcatgctggtagatacaca
tgtaccgctcagacaatcgtggacaattcttcagcttcagctgaccttgttgttcgaggc
cctccaggccctccaggtggtctacgaatagaagacattagagccacttctgtggctctt
acgtggagccgtggttcagacaatcatagtcctatatcgaaatacactattcagaccaag
actattctttcagatgactggaaagatgcaaagacggatcccccaatcattgaaggaaat
atggaggcagcaagagcagtggatttaatcccatggatggagtatgaatttcgtgtggta
gcaaccaatactttgggtataggagaacccagtataccatcaaacaaaattaaaacagat
ggtgctgcaccgaatgtggctccttcagatgtaggaggtggagggggggagaacagagag
ctgaccataacatgggtgcctttgtcaagagaataccactacggcaacaattttggttac
atagtggcgtttaagccctttgatggggaagaatggaaaaaagttacagttactaatcca
gatactggccgctatgtccataaagatgagaccatgcgcccatctactgcattccaagtt
aaagttaaggcctttaacaacaaaggagatggaccttacagcctcacagcagtcattaat
tcagcacaagatgctcccagtgaagccccaacagaagtaggtgttaaagtcttatcatct
tctgagatatctgttcattgggagcatgttgtagaaaaaatagtggaaagctatcagatt
cggtactgggctgcccatgacaaagaagcagctgcacacagagttcaagtcaccagccaa
gagtactcagccaggctagagaaccttctgcccgatacccagtactttgtggaagtcagg
gcctgcaatagtgcagggtgtgggcctcccagtgacatgattgagaccttcaccaagaaa
gcacctccaagccagccgccaaggatcatcagttccgtaaggtctggttcacgctacata
atcacctgggatcatgtggtcgcactatcaaatgaatcgacagtgacaggatataaggta
ctctatagacctgatggccagcatgatggcaagctgtattcaactcataaacactccata
gaagtcccaatccccagggatggagagtatgttgtagaggttcgtgcacacagtgatgga
ggagatggagtagtgtctcaagtcaaaatttcagttttaaacagacaacagatatcttgg
tcaaatcaagaaagacttttaagagcattttag
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