Neomonachus schauinslandi (Hawaiian monk seal): 110593520
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Entry
110593520 CDS
T08474
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110593520 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110593520 (PRPF40B)
Spliceosome [BR:
nsu03041
]
Complex A
U1 snRNP components
U1 related factors
110593520 (PRPF40B)
Complex B
110593520 (PRPF40B)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
110593520
NCBI-ProteinID:
XP_044770782
UniProt:
A0A8M1MAG7
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Position
5:complement(63498975..63512381)
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AA seq
865 aa
AA seq
DB search
MPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGIMPPMLPPMGAPPPLTQIPGMVPPMLPGM
LMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVL
KSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAGKQPQPQ
ILQPQPPQPQPEPPPGPPGPTPMPLGLLEPEPGGSEDCDTSEAAQPVEQGFLQQPEEGPS
SAAAQRQPPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVV
TDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRY
RRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSS
VNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRE
RRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKF
YVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNS
LLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQI
TLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPP
LRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSRLLLGSDHGLRKAKKPKKKT
KKRRHKSNSPESETDPEEKAGKESDEKEPEQDKDRELRRAELPNRSPGFGIKKEKTGWDT
SESELSEGELERRRRTLLQQLDDHQ
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgccccctccaggaatccccccgccctttcctccgatgggactaccccccatgagtcag
agaccaccggccatccccccgatgccacctggcatcatgcccccaatgctgccaccaatg
ggggcgccaccgccactcacgcagataccgggaatggtaccgcccatgctgccagggatg
ttaatgccagcagtgcctgtcaccgccgcgacggctccgggtgcggacacagccagctct
gctgtggctgggacaggccctccgagggccctgtggagtgagcatgtggcccctgatggg
cgcatctactactacaatgctgacgacaagcaatccgtgtgggagaagcccagcgtgctc
aagtccaaggcagagttgctgctgtcccagtgtccctggaaagagtacaagtcagacacg
ggcaaaccttactactataacaaccagagtaaggagtctcgctggacccggcccaaggac
ctggatgacctggaggctctagtcaaacaagaggctgcagggaagcagccccagccccag
atactgcagccgcagccacctcagccccagcctgaacccccgcccgggccgcctggcccc
acccccatgcccctgggccttctagagcctgagccaggtgggagtgaagattgtgatacg
tccgaggctgcccagcctgtggagcaggggtttctgcagcagccggaggagggccccagc
agcgctgctgcacagcgtcagccaccacagcaggaggaagaggaatcaaagccagaacca
gagaggtctggcctcagttggagcaaccgggagaaggcaaagcaggccttcaaggagctg
ctgagggacaaggctgtcccctccaatgcctcgtgggaacaggccatgaagatggtggtc
accgacccccgttacagtgccttgcccaaactgagtgagaaaaagcaggcattcaatgcc
tacaaggcgcagcgggagaaggaggagaaggaagaggcccggctaagggccaaggaggcc
aagcagaccttgcagcatttcctggagcagcacgaacgcatgacctctaccacccgctac
cggcgggcagaacagacctttggggagctggaggtgtgggctgtggtccctgagagggat
cgaaaagaggtttatgatgatgttctcttcttcctggccaagaaggagaaggaacaggcc
aagcagctccggcgccgcaacatccaggccctgaagagcatcctggatgggatgagtagt
gtcaacttccaaactacatggtcccaggctcagcagtacctcatggataaccccagcttt
gctcaggaccaccagctgcagaacatggacaaggaagatgcactgatctgcttcgaggag
catatccgagctttggagagggaggaggaggaggagcgggagcgggcccgcctgcgggag
cggcgtcagcaacgcaagaaccgggaggccttccagaccttcctggacgagctgcacgag
acagggcagctgcactctatgtccacctggatggagctgtacccagcggtcagcactgat
gtccgctttgccaacatgctgggccagccgggctccacccctctggacttgttcaagttc
tatgtggaggagttgaaggcacgattccatgatgagaagaagatcattaaggacatcctt
aaggaccggggcttctgcgtggaggtgaacacagcctttgaggacttcgcccacgtcata
agctttgacaagagggcggctgcgctggacgcaggcaacatcaagctgaccttcaatagt
ctgctggagaaagcagaggcgcgggagcgagagcgggagaaggaggaggcgcgaaggatg
cggcgcagggaagctgccttccgaagcatgctgaggcaggccgtgcctgccctggagctg
ggcactgcctgggaagaggtccgtgagcgctttgtgtgcgactcagcctttgagcagatc
accctggagtcggagcggatccggctcttccgggagttcctgcaggtactggagactgaa
tgccagcacctccacaccaaaggccgaaaacacggcagaaagggcaagaagcaccatcga
aagcgttcccactcgccctcaggctctgagtcggaagaagaggagttgcccccgccgcct
ctccgaccccccaagcggagaaggcggaacccctcagagtcaggctctgagccctcttcc
tcccttgattcggttgaaagtgggggtgctgcccttggaggacggggctccccatcttct
cgccttctccttggatcagatcatggccttcggaaagccaagaaaccaaaaaagaaaact
aagaagagaagacacaagtcgaacagtcctgagagcgagacagatcctgaggagaaagcc
ggcaaggagagtgatgagaaagaaccagaacaggacaaggacagggagctccggcgggca
gaactcccaaaccgctccccaggttttggaatcaagaaggagaagacgggctgggacacg
tcggaaagtgagctgagcgagggtgagctggaaagacggcggcggacgctcctgcagcag
ctggatgaccaccagtga
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