Neomonachus schauinslandi (Hawaiian monk seal): 110593652
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Entry
110593652 CDS
T08474
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03082
ATP-dependent chromatin remodeling
nsu04714
Thermogenesis
nsu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110593652 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110593652 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110593652 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsu03021
]
110593652 (SMARCD1)
03036 Chromosome and associated proteins [BR:
nsu03036
]
110593652 (SMARCD1)
Transcription machinery [BR:
nsu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110593652 (SMARCD1)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110593652 (SMARCD1)
PBAF complex
110593652 (SMARCD1)
GBAF(ncBAF) complex
110593652 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
SWIB_eIF2D
DivIC
Motif
Other DBs
NCBI-GeneID:
110593652
NCBI-ProteinID:
XP_021560602
UniProt:
A0A2Y9I9H4
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All DBs
Position
5:complement(63124040..63136098)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggtgccggagcctcagga
ggggcgggcgcggcggctgccctgggtccgggcgggactccggggcctcccgtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctgccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcacctcagcagatacagcaggtccagcagcaggcggtccaaaatcgaaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaaatcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagct
ttgtccaaatatgatgccaccaaacaaaagaggaaattctcttccttttttaagtccttg
gtgatcgaactggacaaagacctgtatgggccagacaaccatctggtagaatggcacagg
accgccactacccaggagacggacggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgtcctcctgatgctggactaccagcctccccagtttaaattagaccctcgc
ctggctcggctcctgggcatccacacccagacccgtccagtgatcatccaagcactgtgg
caatatattaagacacataagctccaggaccctcacgagcgggagtttgtcatctgtgac
aagtacctccagcagatcttcgagtctcaacgtatgaagttttcagagatccctcagcgg
ctgcacgccttgctcatgccaccggagcccatcatcattaatcacgtcatcagtgttgac
cctaatgatcagaaaaagaccgcttgttatgacatcgatgtggaagtggatgatactttg
aagacccagatgaattctttcctgctgtcgactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagaaactatcaatcagctgaagacccagcgggagttc
atgctgagcttcgccagagaccctcagggtttcatcaatgattggctacagtcccagtgc
cgggacctcaagaccatgaccgatgtggtgggtaacccagaggaagagcgccgagccgag
ttttacttccagccttgggctcaggaggctgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccttgggaatccgaaatacatag
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