Neomonachus schauinslandi (Hawaiian monk seal): 110593882
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Entry
110593882 CDS
T08474
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nsu04040
]
110593882 (PKD1L2)
04091 Lectins [BR:
nsu04091
]
110593882 (PKD1L2)
Ion channels [BR:
nsu04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110593882 (PKD1L2)
Lectins [BR:
nsu04091
]
C-Type lectins
Others
110593882 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
SUEL_Lectin
Ion_trans
Lectin_C
GPS
REJ
Motif
Other DBs
NCBI-GeneID:
110593882
NCBI-ProteinID:
XP_021560994
UniProt:
A0A2Y9IF23
LinkDB
All DBs
Position
16:complement(52415072..52503107)
Genome browser
AA seq
2441 aa
AA seq
DB search
MSTVGLVLLGLALRFRATISNPEEGNFCSKSQVAFRDSCYEFVPLSHTFYGAQSWCEEQG
GHLVFIHDEDTQQFLQKHISQDREWWTGLTGNSAQNGTTEGPGSWLDTSNASYSHWRRGQ
ASLAPNTCCYIGRDASFGWAASDNCTQPFAFICEFGAGQSVACDGLNATMHCGSGEVIQI
QDAFYGRQTPHYCTQGAAGPSEEECSWASIKDKVAGQCQGLQVCQVAADGTYFGDLCPTQ
GSYLWVHYQCQEGLQLMVSNESFIFENVTISLTWLLSPFTGNLSCIISTGDGHTFNPYYP
PSSSSNVTHQFRAPGEFTVFAECTTTEWHVMAQKHVTIRDKMERLHVTGCSSLSKSGASP
LCRAVFGDPLWIQVVLDGGTGVTYTALLGNITLAEFTTPRGLLPYNLTLDRAAQQRMGPG
MHHLEIRATSNTTTSAPSRNITVHFMEPLSGLQASWGSDHLELGEDLLVNISVAHGIPEG
LTFEVAGLNATFTHQEESLQRPFGIYHVAVPLEGTFLVTVMVRNAFSNLSLEVGSITVTA
PSSLQEPSGTNAKEKNREKGNVQVYVEPGQYVNPFTTVTLGWPDSDKDLHFQWSCGHCWA
HWSYCVERQLLCTDQRELVLPPSRLPPPNSAITLHLATWRGRELENREEKCLYVSAPLEL
KPRVSCENCRPANASEDVMLRVTVGDDSSVAMFNWYLEDTSLEKAEPLPAACRFQEFWLS
ALILLQSNTSMLWLNSSFRQTWGQAIRIRATALDRHAYGEDTXVISSLPAPEVPICTITP
EEGTILTSFTIFCNTSSALGPLEYCFCLESGSCLHCGPEPALLSVYLPLGKVNNDFMLTV
VISVSNLSGDKQQAHAVVKVGLGDTHVDNVAFQAAVLENITATLQGERDPERLFQLSRAV
SSMLDQECQEQGCRGLLNMDVRQKVREHAQGSLSAVTPTLGDIQXQVLREVTHPNEELMP
MAQREATWALQHASEALLAVSSKAHPEDQGRQAATKDLFQAVSSTLEASLREGPEDPAEA
KGTQMASVPQLLRVVEHVQAALLLGTLPGGLPATLATPSISIYTNRIQPRSWRGSSVHAA
AASSATFTLPAASSLGSMGDSPEPVDIRVMSFPKGPFPAWSHFDVSGTVGGLCLSSPSGH
LIPMKNLSENIEILLPRLLEGHSEPTVLNLTSPEALWVNLTSDGAALGIQLHWRPDIPFI
LSLGYGYHPNKTSYDAKAHLPPGATADGLSTWILNPEDLHFGKGVYYLTVIPESDLELTL
GRDFTVGITTFLSHCVFWDEVWGTWDNSGCQVGPRTTHSQTHCLCNHLTFFGSTFLVMPN
TIDICQIAELFATFEDNPVVVTTVGCLCVAYVLVVIWARRKDAQDQAKVKVTVLEDNDPF
AQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGESEPHHLSDPDIPVFERGGVDVFLLSTL
FPLGELRGLRLWHDNSGDRPSWYVSRVLVHDLARDRKWHFLCNSWLSTDVGDCVPDKVFP
VATEQDRKRFSHLFFMKTSTGFHDGHIWYSIFRCSAWSNFTRVQRVSCCFSLLLCTMLTS
IMFWGVPKDPAEQKMDLGKIEFTWQEVMIGLESSLLMFPINLLIVQIFRKTRPRVTKEQN
TGKCDRGSPSLASSLQPMENGLLTLEVVTKDMWRLVSSLFKALKVPSPASGWDSATLMDI
NQLLALEEVVCLQNMVGPEFWEEAKQRKDPLMLPLGSLRVQEQMQCLMPEVGPSDPQKDN
AYKQCLYLQLEHMEQELQLVGPRGFPQSQSHARALSQLQMLKGCLEGQLGTPPPGYTSFS
TASKHPRGLPWWCVLVGWLLVAATSGVAAFFTMLYGLHYGRASSLKWLISVAVSFMESVF
VTQPLKVLGFAAFFALVLKRVEDEEELVASLPGHLSGPGPSALFXVQRCSRKDIYQPPLA
TDIEKMKTTHLKEQKAFAFIREILAYLGFLWMLLLVAYGQRDPSTYHFNRHLEHSFTQGF
SAVLSFKEFFMWANXTLMSNLYSHYPGFITDGNSKLAGSAQIRQVRVLESSCPLVPQLQA
SLDECHAPYSLDIEDLSDYGEGWNASIPNNSSGFSQAWQYQSQSQCREYPIWGKLTVYRG
GGYVVPLGTDRKSASRILQYLFDNTWLDRLTRAVFVEFTVYNAKVNLFCIITLTLEASAL
GTFFAHMSLQSLRLYPFTDGWHPFVLAAEAIYLLFLLYYMILQAKLMRKQRWCYFHSKWN
LLELTIILASWSALAMFVKRAILAEREIQRYRNHGEEGISFSETAAADAAVGYIIAFLVL
LSTVKLWHLLRLNPKMNMITSALCRAWGDISGFIIVILIMLLAYSIASNLIFGWKPRSYK
TLFDAAETMISLQLGIFNYEEVLDYSPVLGSFLIGSCIIFMTFVVLNLFISVILVAFNEE
QKYDQLSEEGEIVDLLLMKILGFLGIKCKKKEPSNSSEQPK
NT seq
7326 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagtgggcttggtgctcttggggcttgctctgaggtttagggccacaatctcc
aacccagaggaaggcaacttttgctcaaaaagccaagtggccttcagagactcttgctat
gaatttgtgcctctcagtcacaccttttatggggcccagagctggtgtgaggagcaaggg
gggcatttggtctttattcacgatgaagacacccaacagtttctgcagaagcacatctca
caggacagggaatggtggactggactcacagggaactcggcgcagaacggaaccacagaa
gggccagggagctggctggacacctcaaatgcgagctatagccactggcgcagaggacag
gcctctcttgcgccaaacacctgttgttacatcgggagagatgcttcctttgggtgggcg
gcctcagacaactgcacgcagccgtttgccttcatctgcgagtttggtgctggccagagt
gtggcctgtgacggcctcaatgccaccatgcactgcggctcaggggaggtcatccagatc
caggacgccttctatgggcgccagactccccattattgcacccagggtgctgcaggcccc
tctgaggaggaatgcagctgggccagcatcaaggacaaagtggcaggccagtgccagggg
ctgcaagtatgccaggtggcagcagatgggacctactttggagacctgtgccccacccag
ggcagctacctgtgggtgcattaccagtgccaggaaggcctgcagctgatggtgtccaat
gaaagtttcatctttgaaaatgtcaccatctccctcacatggctcctctctcccttcact
ggaaatctgtcatgtataattagtacaggagatggccacactttcaatccctactacccc
cccagttcatccagcaatgtgacccaccagttcagagcccctggggaattcactgtgttt
gccgagtgcacaaccactgagtggcacgtgatggctcagaagcacgtgaccatccgagac
aagatggagaggctccatgtgaccgggtgctccagcctgtccaagtcaggagccagccct
ctctgccgcgctgtctttggggacccgttgtggattcaggtggtacttgatggaggaact
ggggtgacttacactgcactgttgggtaacataaccctggctgagttcaccacaccgagg
ggcctgctaccctacaatctgaccctggacagagcagctcagcagaggatgggccctggg
atgcaccacctggagatccgagccaccagcaacaccaccacctctgcaccctctaggaac
atcacagtccacttcatggagcctctgtcagggctacaggcctcctggggttctgaccac
ttggagcttggagaagacctactggtcaacatctcagtggctcatggcatcccagaaggc
ctgacctttgaagtggcaggactcaatgcaaccttcacccatcaagaagaaagcctccaa
cggccatttgggatttaccatgtggcagttcctcttgaaggcacctttctggtcactgtg
atggtgaggaatgccttctcaaacttaagtttggaagtcggaagcatcactgtcacagct
ccttccagtctacaagaaccatctggaacaaatgccaaggaaaagaatagagagaaaggg
aatgtgcaggtgtacgtggaacctggtcagtatgtgaatcctttcacgactgtgactctg
ggctggccagacagtgacaaggatttacacttccagtggtcatgtggacattgctgggcc
cattggagctactgtgttgagaggcagctgctctgcacagaccaaagggagctggtgctt
cctccgtcccgcctgccaccgcccaactccgccatcaccctgcacctggccacctggaga
ggcagggagctggagaaccgggaggagaagtgcctctatgtgtctgcccccctggaactc
aagcctcgagtcagctgtgagaactgcagaccagcgaatgccagtgaagatgtcatgctc
agagtcactgtgggggatgactcctcagtggccatgttcaactggtatttagaggacacc
tctctggagaaggctgagcctctcccggctgcctgcagattccaggaattttggctgagt
gctttaatcctccttcagagcaacacctccatgctgtggttgaacagctccttccggcag
acctggggccaggccatccggatcagagccacagcccttgaccggcatgcctatggggag
gacacctaagtgatcagctctctgcctgcccctgaggtgcccatctgcaccatcaccccg
gaggagggtaccattctgacgagcttcaccatcttctgcaacacatcctctgccctgggc
cccctggagtactgcttctgtctggagtcaggttcctgtctacactgtggccctgagcct
gccctcctgtcagtttatctgccacttggaaaagtaaacaatgacttcatgctgacagtg
gtcatttctgtctccaatctctcaggggacaaacagcaggcccatgcagtggtgaaggtg
ggacttggagacacccatgttgacaacgtggcattccaggctgcagtgttggagaatatc
actgccactctgcaaggcgagcgggaccctgagcggctcttccagctgtccagagccgtg
tcatccatgctggaccaggagtgccaggagcagggctgcagggggctgctgaacatggac
gtcagacagaaggtcagagagcatgcgcaggggtcactgtctgcggtcactcccaccctg
ggggacatacagncccaggtgctgagagaggtgacccaccccaatgaggagctcatgccc
atggcccagcgggaggccacctgggctctgcagcatgccagtgaagccctgttggcagtg
agttccaaggcccatcctgaagaccaggggcgccaggcggccaccaaggacctgtttcag
gctgtgagcagtacgctagaagcttccctgagggagggaccagaagatcctgcagaggcc
aagggcacccagatggcctccgtgccccagctgctcagagttgtggagcatgtgcaggct
gccctccttctggggacactgcctggaggcctcccagctaccctggccaccccctccatc
tccatatacacaaacagaatacagccccggagttggcgaggctcctctgtacacgctgcg
gctgccagctctgcaacatttaccctgcctgctgcctcctcccttggctccatgggggac
agcccggagcctgtggacatcagggtgatgagtttcccaaagggccccttcccagcctgg
agtcactttgatgtcagtggaactgttggtggcctctgtctgagcagccctagtggacat
ctcatacccatgaagaatctgtcagagaatatcgagatcctgctgccccgacttttggaa
ggacacagtgagccaactgtgttgaacctgaccagtcctgaagctttgtgggtgaacctg
acttcagatggggcagctttggggatccagctgcactggagacctgatatcccattcata
ctcagcctgggctatggctaccaccccaataagaccagctatgacgccaaagctcacctt
ccgccaggggctactgcagatgggctgtccacgtggatcctgaacccagaggacctgcat
ttcggaaaaggtgtctactatctgaccgtgatccccgagtctgacctggagctgaccctt
ggcagggacttcacagttggcattaccaccttcctgtcccactgtgtgttctgggatgag
gtctgggggacttgggataactctgggtgccaggtggggccacggaccacccactcccag
acacactgcctctgcaaccacctcaccttctttggaagcacgttcctggtgatgcccaac
accatcgacatctgccagattgccgagctctttgccaccttcgaggacaaccctgtggtt
gtgaccaccgtgggctgcctctgtgtggcctatgtgctggtggtgatctgggcaaggagg
aaggacgctcaggatcaggccaaggtgaaagtcacagtgctggaggacaatgatcccttt
gcccagtaccactacctggtgacagtctacactggacaccggagaggagcagctacttcc
tccaaggtgactgtcactctatatggcctggatggagagagtgaaccccaccacctgtca
gaccctgacattccagtttttgagcggggaggagtggatgtctttttactctccaccctg
ttccccctgggggaactgaggggcctgaggctgtggcatgacaactcaggggaccggcca
tcctggtacgtgagccgggtgctggtgcatgacctggctagggaccggaaatggcatttc
ctctgcaactcgtggctgtccactgatgtcggagactgtgtccctgacaaagtatttccg
gtggccacagagcaggataggaaaagattcagccacctgtttttcatgaagacctccacg
ggcttccacgatggacacatctggtattccatcttccgctgctcagcttggagcaacttc
acccgtgtccagagggtgtcctgctgcttctccctgctcctctgcaccatgctgaccagt
atcatgttctggggtgttcccaaggacccagctgagcaaaagatggacttgggtaaaatt
gaattcacttggcaggaagtgatgattggactggagagctctctcctcatgttccccatc
aacctcctaatcgttcagatctttcgaaaaacccgtcctcgggtcactaaggagcagaac
actgggaaatgcgacaggggctcccctagcctggcctcctcactacagcccatggagaat
ggccttctgacacttgaagtggtgaccaaggatatgtggagactcgtcagctccctgttt
aaagctctgaaggtgccatcacctgcctctggctgggactcagcaaccctgatggacatc
aaccaactgctggccttggaggaggtcgtctgtctgcagaacatggtagggccggagttc
tgggaggaagccaaacaaagaaaggatcctttaatgctccctcttgggtctctacgagtg
caagaacaaatgcaatgccttatgccagaggtgggcccaagtgaccctcagaaggacaat
gcctacaagcagtgtctctaccttcagctggaacacatggagcaagagcttcagctggtg
gggccccgtggcttcccccagagccagagccacgcccgggccctcagccagctgcagatg
ctgaagggctgcctggagggacagctgggcaccccacccccagggtacaccagcttctcg
acggcgagcaagcatcctcgtggcctgccctggtggtgcgtcctggtgggctggctcctg
gtggcagccaccagcggcgtggcagccttcttcaccatgctctacggcctgcactatggg
cgggccagctccctcaagtggctcatctctgtggctgtctccttcatggagagcgtgttt
gtcacccagcccctgaaggtgctgggctttgctgccttctttgcactggtcttgaagaga
gtggaggatgaggaggagcttgtggcctccctcccaggacatctgtctggcccaggccct
tctgccttgttttgagtacaaagatgcagcagaaaggacatttaccagccgcctttggcc
actgacatcgagaagatgaaaaccacccatctcaaggaacagaaggcatttgccttcatc
agagaaatcttggcatacctgggcttcctgtggatgctgctgctggttgcctatgggcag
agggaccccagcacctaccacttcaacagacaccttgagcacagcttcacccaaggcttt
tcagctgtgttaagcttcaaggaattcttcatgtgggccaacnccaccctcatgagcaac
ctgtacagtcattacccaggctttatcactgatgggaactctaagctggctggcagtgcc
cagattcgccaagtgagggtcctggaaagctcttgccctcttgtcccacagttgcaggct
tctcttgatgaatgccatgcaccatattccctggatattgaagacctgtcagactatggg
gaaggctggaatgcctccatacccaataacagcagtggcttttcccaggcttggcagtac
cagagccagagccaatgccgagagtatcccatctggggcaaactcactgtgtaccgggga
ggaggttatgtggtccctttggggactgatcgcaaaagtgcatcaagaattctccagtat
ctctttgacaacacctggctggacagactgaccagagccgtttttgtggagttcactgtt
tacaacgccaaggtcaacctgttctgcatcatcactctgaccctggaggctagcgccctg
ggaaccttctttgcacatatgagcctgcagagcctgcgcctgtaccccttcactgacggc
tggcaccccttcgtgctagcagcagaagccatctacctcctgttcctcctctactacatg
attttgcaggccaagctcatgaggaaacagaggtggtgctatttccatagcaagtggaat
cttttggagctgaccatcatcctggccagctggagtgccctggcgatgtttgtgaagagg
gccatcctggcagaacgtgaaatccagcgctaccggaaccatggagaggagggtatcagt
ttcagtgagacagcagcagctgatgctgccgttggctacatcattgccttcctggtattg
ctgtccacagtgaagctttggcatctgctcaggttgaaccccaaaatgaatatgatcact
tcagccctatgccgtgcttggggggacatatcaggctttatcatcgtcatccttatcatg
cttctggcttactccattgcgtcaaacttaatatttggttggaaaccccgttcctacaaa
accctctttgatgcagcagaaacgatgatcagccttcagctaggaatctttaactacgag
gaggtcctggactacagcccagtgcttggctccttcctgattgggtcttgcatcattttc
atgacatttgtggtgctgaatctatttatctctgtcatcctggtggccttcaatgaggag
caaaaatatgatcagctgtcggaggaaggagagattgttgatttgttgctgatgaaaata
ctcggtttcctgggtattaaatgtaaaaaaaaggagcctagcaacagcagtgagcagccc
aagtag
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integrated database retrieval system
