Neomonachus schauinslandi (Hawaiian monk seal): 110594119
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Entry
110594119 CDS
T08474
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsu03041
]
110594119 (DDX39A)
Enzymes [BR:
nsu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110594119 (DDX39A)
Spliceosome [BR:
nsu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110594119 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110594119
NCBI-ProteinID:
XP_021561249
UniProt:
A0A2Y9IFQ0
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All DBs
Position
1:204783865..204791898
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AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEEDEEPQAPPESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCH
TRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVR
NRSLNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDIS
TYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacaggatgtggaaaatgagcttctggattatgaggaagatgaagagccccag
gctcctccagagagcactcctgctccccccaagaaagacgtcaagggttcctatgtttcc
atccacagctctggcttcagggactttctgctaaagccagagctcctgagggccatagtg
gactgtggctttgagcatccatctgaggtccagcacgagtgtattccccaagccatcctg
ggcatggacgtcctgtgccaggccaagtctgggatgggcaagacggcagtcttcgtgctg
gccaccctgcagcagatcgagccagtaaacggacaggtaacagtcctggtcatgtgccat
acgcgggagctcgccttccagatcagcaaagagtacgaacgcttctccaagtacatgccc
agtgtcaaggtgtccgtgttctttgggggcctttccatcaagaaggatgaagaggtattg
aagaagaactgtccccatgtcgtagtggggacaccaggccggatcctggcactggtgcgg
aacaggagcctgaatctgaagaacgtgaagcacttcgtgctggacgagtgtgacaagatg
ctggagcagctggacatgcggcgggatgtgcaggagatcttccgtctgacaccccatgag
aagcagtgcatgatgttcagcgccaccctgagcaaggagatcaggcctgtctgcaggaag
ttcatgcaagaccccatggaggtgtttgtagacgatgagaccaagctcacactgcacgga
ttgcagcagtattacgtcaagctcaaggacagtgagaagaaccgcaagctctttgatctc
ttggatgtgttggagtttaaccaggtggtaatcttcgtgaagtcagtgcagcgctgcatg
gccctggcccagctcctcgtggagcagaacttcccggccattgctatccacaggggcatg
gcccaggaggagcgtctgtcacgctatcagcagtttaaagacttccagcggcggatcctg
gtggccaccaatctgtttggccgagggatggacattgagcgagtcaacatcgtcttcaac
tatgacatgcccgaggactcggacacctacctccaccgagtggcccgtgcaggtcgcttt
gggaccaaaggtctggctatcacttttgtatctgacgagaatgatgccaaaatcctcaat
gacgttcaggacaggtttgaagtgaacgtggcagaacttcctgaagaaatcgacatctcc
acatacattgagcagagccggtaa
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