Neomonachus schauinslandi (Hawaiian monk seal): 110594235
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Entry
110594235 CDS
T08474
Symbol
CDH1
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu04015
Rap1 signaling pathway
nsu04371
Apelin signaling pathway
nsu04390
Hippo signaling pathway
nsu04514
Cell adhesion molecules
nsu04520
Adherens junction
nsu05100
Bacterial invasion of epithelial cells
nsu05200
Pathways in cancer
nsu05213
Endometrial cancer
nsu05216
Thyroid cancer
nsu05218
Melanoma
nsu05219
Bladder cancer
nsu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
110594235 (CDH1)
04390 Hippo signaling pathway
110594235 (CDH1)
04371 Apelin signaling pathway
110594235 (CDH1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110594235 (CDH1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110594235 (CDH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110594235 (CDH1)
09162 Cancer: specific types
05226 Gastric cancer
110594235 (CDH1)
05216 Thyroid cancer
110594235 (CDH1)
05218 Melanoma
110594235 (CDH1)
05219 Bladder cancer
110594235 (CDH1)
05213 Endometrial cancer
110594235 (CDH1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110594235 (CDH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsu03036
]
110594235 (CDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nsu04515
]
110594235 (CDH1)
04090 CD molecules [BR:
nsu04090
]
110594235 (CDH1)
Chromosome and associated proteins [BR:
nsu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
110594235 (CDH1)
Cell adhesion molecules [BR:
nsu04515
]
Cadherins
Major cadherins
110594235 (CDH1)
CD molecules [BR:
nsu04090
]
Proteins
110594235 (CDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
Cadherin_2
RET_CLD1
Cadherin_4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
110594235
NCBI-ProteinID:
XP_021561409
UniProt:
A0A2Y9IG40
LinkDB
All DBs
Position
16:42101641..42184796
Genome browser
AA seq
881 aa
AA seq
DB search
MGPRYPSVSALLLLLQVSSWLCQEPEPCRPGFGADSYTFTVPRRHLERGRILGRVNFEGC
TGQPRTAYVADDTRFKVSTDGVLTVKRPLQLHKPEMSFLVHAWDSSRRKLSTRVILKAAE
HHHHHRHDALSETQTEVLTFPNSQHGLRRQKRDWVIPPISCPENEKGPFPKNLVQIKSNR
DKEIKVFYSITGQGADTPPVGVFVIERETGWLKVTEPLDREQIAKYILYSHAVSSNGNAV
EDPMEIVITVTDQNDNKPEFTQQVFEGSVMEGALPGTSVMQVTATDADDDENTYNAAIAY
RIVTQDPLLPSSMMFTINKDTGVISVLTTGLDRETIPTYTLVVEAADLQGEGLSTTATAV
ITVTDINDNPPIFKPTTYQGRVPENKANVVITVLKVTDDDVPNTPAWQAVYTILNNNNEQ
FVVTTDPVTNDGILKTAKGLDFEAKQQYILYVTVVNVAPFEVILSTSTATVTVDVEDVNE
APVFVPCPKTVEIPEDFGVGLEITSYTATDPDSFMEQRITYRIWRDAANWLEINPESGAI
FTRAELDREDMEHVKNSTYEALIVAIDTGSPVATGTGTLLLILSDVNDNGPIPEPRNMDF
CQKNPQPRVINIIDPDLPPNTSPFTAELTHGASVNWTIEYNDQAHESLILKPKKTLELGD
YKINLKLTDNQNKDQVTTLDVFVCDCEGVVNSCKRMAPYTEAGLQVPAILGILGGILALL
ILILLLLLFVRRRGVVKEPLLPPEDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLDARPE
VTRNDVAPTLVSVPQYRPRPANPDEIGNFIDENLKAADTDPTAPPYDSLLVFDYEGSGSE
AASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDE
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggccctcggtaccctagcgtctccgcgctcctgctgctgctacaggtttcatcgtgg
ctctgccaggagccagagccctgccgtcctggctttggcgctgacagctacacgttcaca
gtgccccggcgacatttggagagaggccgaatcctgggcagagtgaattttgaaggatgt
accggtcaaccaaggacagcctatgttgctgatgatacacgattcaaagtgagcacagat
ggtgtgcttacagtcaagcggcctctccaacttcataaaccggagatgagttttctggtc
catgcctgggactccagccgcaggaagctctccaccagagtcatactgaaggcagccgag
caccaccaccaccaccgtcatgacgctctctctgaaacccagacagaagtcctcacgttt
cccaactcccagcatggtctcagaagacagaagagagactgggttatccctcctatcagc
tgcccagaaaatgagaaaggcccatttcctaaaaatctggttcagatcaaatctaacaga
gacaaagaaatcaaggttttctacagcatcactggccaaggagctgacacacctcctgtt
ggtgtgtttgttattgaaagagaaacaggatggctgaaggtgacagagcctctggataga
gaacaaattgccaagtacattctctactctcacgccgtgtcttctaatgggaatgcagtg
gaagacccaatggagatcgtgatcacggtgacggatcagaatgacaacaagcccgagttc
acccagcaggtcttcgaaggatctgtcatggaaggtgctcttccaggcacctccgtgatg
caggtaacagccacagatgcagacgacgatgagaacacctacaacgctgccattgcttac
cgcatcgtcacccaagaccccctcctgcctagcagcatgatgttcactatcaacaaggac
acaggagtcatcagcgtgctcaccaccgggctggaccgggagactattcccacgtacacc
ctggtggttgaggctgctgacctgcaaggtgaaggcttgagtacaaccgcaacagctgtg
atcacagtcactgacatcaacgataacccccccatcttcaaacccaccacgtaccagggg
cgggtgcctgagaacaaggctaacgttgtaatcaccgtactcaaagtgactgatgacgat
gtccccaataccccagcatggcaggccgtgtacaccatattgaacaataacaatgagcaa
tttgtcgtcaccacagacccagtaaccaacgatggcattttgaaaacagctaagggcttg
gatttcgaggccaagcagcagtatattctgtacgtgaccgtggtgaatgtagcgccgttt
gaggtcattctctccacctccacagccaccgtcactgtggacgtggaggatgtgaatgaa
gcccccgtctttgtgccttgtccaaagacagtggaaatacctgaagactttggcgtgggc
ctggaaatcacatcctacactgccacggatccagatagttttatggaacagaggataacg
tatcggatttggagggatgctgccaactggctggagattaatccagaatctggtgccatt
ttcactcgggctgagctggacagagaggacatggagcatgtgaagaacagcacgtacgag
gccctcattgtagccattgatacgggttctccagttgctactggaacgggaacccttctc
ctcatcctctctgatgtgaatgacaatggccccataccagaacctcgaaatatggacttc
tgtcagaagaatccacagcctcgtgtcatcaacatcattgatccagatctgccccccaac
acatctccctttacagcagaactaacacacggggcaagtgtcaactggaccattgagtac
aatgaccaagcccatgaatctctcattttgaagccaaagaaaaccttagagttgggtgac
tacaaaataaatctcaagctcacggataaccagaacaaggaccaggtgaccaccctagat
gtgttcgtgtgtgactgcgaaggggtcgtcaacagctgcaagaggatggcgccctacacc
gaagcaggcttgcaggttcccgccattctgggcattcttggaggaatcctcgctttacta
atcctgattctgctgcttctgctgtttgttcggaggagaggggtggtcaaagagccctta
ctacccccagaagatgacacccgggacaacgtttactattatgatgaagaaggaggcgga
gaagaggatcaggactttgacttgagccagttgcacaggggcctggatgctcggcccgaa
gtgactcgcaatgatgtggcgccaaccctcgtgagtgtgccccagtaccggccccgccct
gccaatcctgatgaaattggaaattttattgatgaaaacctgaaggcagcggacactgac
cccacagctcctccttacgactctctgctcgtgtttgactatgaaggaagcggttctgaa
gctgctagtctgagctccttgaactcctcagagtcagaccaagaccaggactatgactac
ctgaacgaatggggcaatcgcttcaagaagctggcggacatgtatgggggtggggaggac
gagtag
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