Nicotiana sylvestris (wood tobacco): 104209956 Help Entry 104209956         CDS       T05026                                  Name (RefSeq) uncharacterized protein   KO K13175   THO complex subunit 6 Organism nsy  Nicotiana sylvestris (wood tobacco) Pathway nsy03013   Nucleocytoplasmic transport nsy03040   Spliceosome Brite KEGG Orthology (KO) [BR:nsy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104209956   09122 Translation    03013 Nucleocytoplasmic transport     104209956  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nsy03019]     104209956    03041 Spliceosome [BR:nsy03041]     104209956 Messenger RNA biogenesis [BR:nsy03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      104209956 Spliceosome [BR:nsy03041]  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     104209956 SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_WDR3_2nd WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz ResIII Beta-prop_EML_2 WDR90_beta-prop_4th WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_EML Beta-prop_RIG_2nd NBCH_WD40 DSE1_N Beta-prop_EIPR1 Beta-prop_Nup120_160 DUF2780 AAA_22 Beta-prop_WDR19_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd CMS1 Ge1_WD40 Motif Other DBs NCBI-GeneID:  104209956 NCBI-ProteinID:  XP_009757032 UniProt:  A0A1U7ULD7 LinkDB All DBs Position 7:complement(4346898..4360379) Genome browser AA seq 844 aa AA seqDB search MVTAMDCRNWDEDVYRDSILLERESQCRTVFRTAFAPNPNPNHNSYPDLIVAGISDGTIA SYSISSCLDLSSAGNSLVPVAESSWLVQGHDGPAYDVKFYGNDEDSLLLSCGDDGRIRGW KWKELLGSKEPVQGGTSEPILDLVNPQQKGPWGALSPIPENNCMAVNTQTGSIFAAAGDS CAYCWDVEKNEIKMVLKGHSDYLHCIVARNSHNQVITGSEDGTARIWDCRTGKCIQIIDL HKDKRSRELFPYVSCIALDASESWLACGSGRSLSVWNLPACECVSRITTTAAIQDAIFHD NQVLAVGAEPLLSRFDLNGDIISQIPCAPQSLFSISLHPSGVTAVAGYGALVDIVSQFGS HLCTFQWANSSEQEKIWVSLATTEPSKHSHIIVSYLYKLQWAVDPRSLGKNPNFSYYSQL QHLFSSSTSSVMAGAAPEGSQFDARQYDSKMTELLNAEGQDFFTSYDEVYDSFDAMGLKE NLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYELLDC QALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRV FDMLRRQSLRPDHIKMFVLDEADEMLSRGFKDQIYDIFQLLPPKIQVGVFSATMPPEALE ITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIFVNTR RKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVS LVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTSDDERMLSDIQRFYNVVIEELPANV ADLL NT seq 2535 nt NT seq  +upstreamnt  +downstreamnt atggtaacagcgatggactgcaggaactgggacgaagacgtatacagagactccatttta ctggagagagaatcccaatgccgaactgttttccgtactgcattcgccccgaacccgaat ccaaaccataattcttatccggacctcatcgtcgccggtattagcgacggcactatcgcc tcttactccatctcctcttgcctcgatttgagctccgcgggcaattcgttggtgccagtg gctgaatctagttggctggtacaaggacatgatgggcctgcttatgatgttaaattttat ggcaacgatgaggattcactattattgagttgtggtgatgatggtcggattcgtggatgg aaatggaaagaattgttggggtctaaggagccggtgcaaggaggcacatcagagccaatt cttgacttggtgaatcctcaacaaaaaggtccatggggtgcactttctccaattccagag aataattgcatggccgttaatactcagactggatccatttttgctgctgctggtgattct tgtgcatactgctgggatgtggagaagaatgaaataaagatggttttgaaagggcattca gactacttgcattgcattgttgcgcgaaattctcacaatcaggttataactggttcagag gatgggacagcacgaatatgggattgcagaactggtaagtgtattcaaataattgatcta cataaggataagaggtcgagggagttgtttccatatgtcagttgcattgctcttgatgca agtgagagttggctggcttgtggaagtggccggtctttatcggtatggaaccttccagct tgtgaatgcgtttcacgaatcacgacaactgctgctatccaggatgccatatttcatgat aatcaagttttagcggttggagcggagcccctgcttagtcgctttgacctgaacggagat attatttcacagataccatgtgctcctcagtcactgttttccatttctttacatccttca ggggtaacagcagtagctggttacggagcattagtggatattgtgtcgcaatttgggagt catttgtgcacattccagtgggcaaattcgtcagaacaagaaaaaatatgggtctctttg gctactacggaaccctcaaaacattcgcacattattgtatcgtatctctacaaactccag tgggccgtagatccgagaagtttgggaaaaaaccctaacttctcttattactcacaactg cagcatctcttctcttcctctacatcttcagtcatggcgggtgcagctcctgaaggatca cagtttgatgctcgtcagtatgattcgaaaatgacagaattgctaaatgctgaagggcaa gatttctttacctcatacgatgaggtctatgatagttttgatgccatgggattgaaggag aacctcctcaggggcatttatgcatacggttttgagaaaccctcagcaattcaacaaaga ggaattgtacctttctgcaaaggtcttgatgtgattcaacaggctcagtctggaactgga aagactgctactttttgctctggaattctgcaacaactagactatgaactactagactgt caagctttggtcttggcacctactcgtgagcttgcacagcaaattgaaaaggtcatgcga gcacttggagactatcttggtgtcaaggttcatgcttgtgtgggaggcaccagtgtccgt gaggatcaacgcatcctttcaagtggggttcacgttgttgtgggaacccctggacgtgta tttgacatgctaaggagacagtctctccgccctgatcacattaagatgtttgtattggac gaggctgatgaaatgctttccagaggcttcaaggatcagatctacgatattttccagctc ttgcctcctaagattcaggttggtgttttctctgccacaatgcctcctgaggcccttgag atcacaaggaagttcatgaacaaacccgtgaggattcttgtgaaacgtgatgaactgacc ttagaaggtattaagcagttttatgtgaatgtggacaaggaagaatggaagcttgagacc ctttgcgatttgtatgaaaccttggccatcacacagagtgtgatatttgtgaatactcgt cgcaaagttgattggttgactgacaagatgcgaagcagagatcatacagtctcggccact catggtgacatggatcagaatactagggatattataatgcgcgaatttcgttctggttcc tctcgtgttctcatcaccaccgatcttttggccagaggaattgatgtccaacaagtttcc cttgtcataaattatgatctccccactcaacctgagaattaccttcatcgtattggacgt agtgggaggtttggtaggaagggtgtttcaatcaacttcgtaaccagcgacgatgagaga atgctgtctgacattcagaggttttacaatgtggtgattgaggagctcccagcaaatgtt gctgatctcctgtaa

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