Nicotiana sylvestris (wood tobacco): 104210290
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Entry
104210290 CDS
T05026
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104210290
Transcription machinery [BR:
nsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
104210290
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
HTH_31
Motif
Other DBs
NCBI-GeneID:
104210290
NCBI-ProteinID:
XP_009757464
UniProt:
A0A1U7V5F1
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Position
8:complement(166446864..166452963)
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AA seq
554 aa
AA seq
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MGFRLHLKWGFSVQPPFSSNSSAWPSSHSFKGKEALYDPARSLKPFINGDCEPSHSDPFR
VRTCLSDPQLWTSDISVTTEIKTRIGRGSPSNIYGDIGSDKTGISPDGEKPSYLSTTRAP
HFSLLMKNIDLLENMFADSEMSRLENDILVQLEKLGALEFFHSRLSRTLHSTSPEVLDVP
RELVEEIEKDDLVGNGIDKVVVRSRKKQERNSRRNRASGIANDIITVHPHTKNIQEDMQQ
PKFYSGKRTHASRNKRQKIAKNEAEMSRGVKLVAELERIRSILEEETGRVASFSSWAEAA
GVEQKELQHHLHFGWYCRDELLKSTRSLVLYLARNYRGLGVAFEDLIQAGNMGVLQGAVR
FDDTRGYKFSTYVQYWIRKSLSKLVAQHARGIRIPFTICKAINQIHKARKALSRSHGKFP
GDNEIAKYTGLSTARIAMASKCLRVVGSIDQKVGHCISAKVLELTPDKSIVSPEETVIRE
DIIDNMYALLESLDPKEQQVIYFRFGLENHQRKSLEEIGRLYGVSKEWIRRIERRALTKL
RSADCFQDLTHYSV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaggctgcacctcaaatggggtttctctgtccaaccccctttctcctccaac
tcatcagcatggccttcttcacattctttcaaaggaaaggaggctttatacgatccagct
cggtctctcaaaccttttatcaacggggactgtgaaccttcacatagtgatcctttcaga
gtgcggacttgtttatctgacccccaactgtggacgagtgatatatcagtaactacagaa
ataaagacacgaatcggcagaggatcccctagcaatatatatggagatattggcagtgat
aagactgggatatcacctgatggggaaaaaccatcatatttaagcacaaccagagcccct
cattttagtttactaatgaaaaatattgatttgctggaaaacatgtttgctgattcagag
atgtcaagattagaaaacgatattctggtgcaactagaaaagcttggagctttagaattc
tttcatagtcgtctctcaagaacacttcattctacttctcctgaagtgcttgacgtgcca
agggagcttgttgaagaaattgaaaaagatgaccttgttggaaatggaatagataaggta
gtcgtacgttctagaaaaaagcaagagcggaattcaaggagaaacagagcatccggaatt
gctaatgacattattacagtgcatccacataccaaaaacatccaggaggatatgcaacag
ccaaagttttattctgggaaaagaacacatgcttctagaaataaaagacagaagatcgct
aagaatgaggcagaaatgtcaagaggtgttaagctggtggccgaactggaaagaatcagg
tcaatccttgaagaagaaactggtcgagtagctagtttcagtagctgggcagaagctgct
ggagttgaacagaaggagttgcagcaccacttgcattttggttggtattgcagggatgag
cttctgaaaagcacacggtccttagtcttgtatttggcaagaaactacagggggcttgga
gtggcatttgaagacttaattcaggctgggaacatgggtgtgctacaaggtgctgtaaga
tttgacgacactaggggatacaaattctcaacttacgttcagtattggataagaaaatca
ttgtcaaaattggtggcccagcatgctagagggatccgaattcccttcactatatgcaaa
gcaataaatcaaatacataaggctcgaaaagctctcagtaggagccatggaaaatttcca
ggtgataatgaaattgccaagtacacgggtctatctacggctaggattgcaatggctagt
aaatgcctgagagttgtgggttcaattgatcagaaagttggacattgcatcagtgcaaaa
gttttggaactcacaccagataaatcaattgtaagcccggaggaaactgtcattagggaa
gacataatagacaacatgtatgctcttttggaaagcttggatccaaaagagcagcaagta
atatattttaggtttggtcttgaaaatcatcagcgcaaatccctcgaggagattgggagg
ctttatggagtaagtaaagagtggattaggagaatagaacgaagagctctcacaaaattg
agaagcgcggattgtttccaagatttaactcattactctgtatag
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