KEGG   Nicotiana sylvestris (wood tobacco): 104210481
Entry
104210481         CDS       T05026                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040  Pentose and glucuronate interconversions
nsy01100  Metabolic pathways
Module
nsy_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    104210481
Enzymes [BR:nsy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     104210481
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix NosD Fn3_VIN3
Other DBs
NCBI-GeneID: 104210481
NCBI-ProteinID: XP_009757689
UniProt: A0A1U7V624
LinkDB
Position
6:60360405..60362393
AA seq 391 aa
MNTRKFIALILLTVFFHSSSGSKTSYNVQSYGAKPDGKTDSTKAFLSAWAAACASTKSVV
IYVPQGRYLIGSAAFWGQYCKNKATTIRIDGTLVAPSDYKIIGNNGNWLKFERVNGVTIS
GGTFDGQGASLWACKASGKSCPAGATTLAFYNSNNIVISGLTSLNSQMFHVVLDGCQNAK
LQKMKISASASSPNTDGIHIEASSGVTILKTVIGTGDDCVSIGPGTSNLWIENVSCGPGH
GISIGSLGWGMQEPGVQNVTVKTTTFRGTQNGLRIKTWARPSNGFVKGVLFQHSVMVNAR
YPILIDQEYCPDQKNCPGQESGVKISDVTYQDVHGTSTSQVAVKLACSKANPCKGITLED
VNLTFKNQQPQALCSNAAGTSYGVNKPASCL
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgaataccagaaaatttattgcccttattcttctaaccgtcttctttcattcatcatca
ggaagcaagactagttacaatgtgcaaagttatggagcgaaacctgatggcaagactgat
tcaacaaaagcatttctgagtgcatgggctgcagcttgtgcttccacaaagtctgttgtg
atatatgtgccacaaggaaggtatttaataggaagtgctgcgttttggggacaatattgc
aagaataaagctactactatcaggattgatggcaccttagtggcaccctctgattataaa
attataggtaataatggaaattggctaaagtttgagagagtcaacggagtcaccatttct
ggtgggacttttgatggccaaggtgcttctctttgggcttgtaaagcctctggcaagagt
tgtcctgccggagcaacgacacttgccttttacaattcaaacaacattgtgataagtgga
ttgacttcattaaacagccagatgttccatgtggtacttgatgggtgccaaaatgctaag
ctgcagaagatgaaaatctcagcctcagctagcagcccaaacactgatgggattcacata
gaagcttcctcgggtgtcactattctgaaaactgtaattggtactggagatgactgtgtt
tcaataggccctggcacctccaacttgtggattgaaaatgtctcctgtggccctggccac
ggcataagcattggaagtctaggatggggtatgcaagaaccaggagttcaaaatgtcaca
gtgaagaccactacatttagaggtacacaaaatggtctgagaataaagacatgggcaagg
cctagcaatggatttgtaaaaggtgttctctttcagcattctgtgatggtgaatgccaga
taccccatcttaattgaccaagaatattgccctgatcagaagaattgccctggccaggaa
tcaggagttaagataagcgacgtaacatatcaagacgttcatggaacatcaacatcacaa
gtcgcagtaaaacttgcttgtagtaaggctaatccctgcaaagggattacactggaggat
gtaaatcttacctttaaaaatcaacaaccacaagcattatgctccaatgctgctggaact
tcctatggtgtaaataaaccagcaagctgtttgtag

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