Nicotiana sylvestris (wood tobacco): 104210481
Help
Entry
104210481 CDS
T05026
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104210481
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104210481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
104210481
NCBI-ProteinID:
XP_009757689
UniProt:
A0A1U7V624
LinkDB
All DBs
Position
6:60360405..60362393
Genome browser
AA seq
391 aa
AA seq
DB search
MNTRKFIALILLTVFFHSSSGSKTSYNVQSYGAKPDGKTDSTKAFLSAWAAACASTKSVV
IYVPQGRYLIGSAAFWGQYCKNKATTIRIDGTLVAPSDYKIIGNNGNWLKFERVNGVTIS
GGTFDGQGASLWACKASGKSCPAGATTLAFYNSNNIVISGLTSLNSQMFHVVLDGCQNAK
LQKMKISASASSPNTDGIHIEASSGVTILKTVIGTGDDCVSIGPGTSNLWIENVSCGPGH
GISIGSLGWGMQEPGVQNVTVKTTTFRGTQNGLRIKTWARPSNGFVKGVLFQHSVMVNAR
YPILIDQEYCPDQKNCPGQESGVKISDVTYQDVHGTSTSQVAVKLACSKANPCKGITLED
VNLTFKNQQPQALCSNAAGTSYGVNKPASCL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaataccagaaaatttattgcccttattcttctaaccgtcttctttcattcatcatca
ggaagcaagactagttacaatgtgcaaagttatggagcgaaacctgatggcaagactgat
tcaacaaaagcatttctgagtgcatgggctgcagcttgtgcttccacaaagtctgttgtg
atatatgtgccacaaggaaggtatttaataggaagtgctgcgttttggggacaatattgc
aagaataaagctactactatcaggattgatggcaccttagtggcaccctctgattataaa
attataggtaataatggaaattggctaaagtttgagagagtcaacggagtcaccatttct
ggtgggacttttgatggccaaggtgcttctctttgggcttgtaaagcctctggcaagagt
tgtcctgccggagcaacgacacttgccttttacaattcaaacaacattgtgataagtgga
ttgacttcattaaacagccagatgttccatgtggtacttgatgggtgccaaaatgctaag
ctgcagaagatgaaaatctcagcctcagctagcagcccaaacactgatgggattcacata
gaagcttcctcgggtgtcactattctgaaaactgtaattggtactggagatgactgtgtt
tcaataggccctggcacctccaacttgtggattgaaaatgtctcctgtggccctggccac
ggcataagcattggaagtctaggatggggtatgcaagaaccaggagttcaaaatgtcaca
gtgaagaccactacatttagaggtacacaaaatggtctgagaataaagacatgggcaagg
cctagcaatggatttgtaaaaggtgttctctttcagcattctgtgatggtgaatgccaga
taccccatcttaattgaccaagaatattgccctgatcagaagaattgccctggccaggaa
tcaggagttaagataagcgacgtaacatatcaagacgttcatggaacatcaacatcacaa
gtcgcagtaaaacttgcttgtagtaaggctaatccctgcaaagggattacactggaggat
gtaaatcttacctttaaaaatcaacaaccacaagcattatgctccaatgctgctggaact
tcctatggtgtaaataaaccagcaagctgtttgtag
DBGET
integrated database retrieval system