Nicotiana sylvestris (wood tobacco): 104210600
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Entry
104210600 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
104210600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104210600
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104210600
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
104210600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
PHD_4
zf-RING_4
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
104210600
NCBI-ProteinID:
XP_009757843
UniProt:
A0A1U7UUG1
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Position
5:complement(1363907..1368413)
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AA seq
334 aa
AA seq
DB search
MELDSIECISSSDGIIDEDEIPLHHPHIIHSQFPSSKSPLNINNNINNNSNSNNSDGISI
HSTTSVHELLECPVCTNSMYPPIHQCHNGHTICSTCKARAHNRCPTCRQELGDIRCLALE
KVAESLELPCKYGSVGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECSVVGDIPYLVAHL
RDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFNCFGQCFCLHFEAFQLGTAPVYMA
FLRFMGDEIEARNYSYSLEVGGNGRKLTWEGTPRSIRDSHRKVRDSHDGLVIQRNMALFF
SGGERKELKLRVTGRIWKEQQNPDGGACMPNLCT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggaattggatagtattgaatgtatatcatcttcagatggtataatagatgaagatgag
atccctttacatcatccacatataattcattctcaattcccatcttcaaaatcacccctt
aatatcaacaacaatattaacaataatagcaacagcaataatagtgatggcatttcaatt
cattctacaactagtgttcatgagcttcttgaatgccctgtttgtaccaattctatgtac
cctccaattcatcagtgtcacaatggacacacgatttgttcgacatgtaaagccagggca
cacaaccgatgtcccacttgtcgacaagagcttggagatatcagatgcttagcactggaa
aaagtggctgaatcgcttgaactcccttgcaaatatggttctgttgggtgtcctgagata
tttccttattacagtaagctaaaacatgaagcagtttgcaactttagaccatacaactgc
ccttatgctgggtctgagtgctcggttgtcggtgatattccttacttggttgctcatttg
agggatgatcacaaggtagacatgcattcagggtgcacttttaaccatcggtatgtcaaa
tctaatcctcgagaagtggagaacgcgacgtggatgttaacagtttttaattgttttggt
cagtgcttctgtctccattttgaagcctttcagctcggaacagctcctgtttacatggca
tttcttcggtttatgggagatgagatcgaggctcgaaactatagctacagcctggaagtt
ggaggcaatggaaggaaacttacttgggaaggtacgccccgaagcataagagacagtcac
cggaaagttagggatagccacgatggactcgttatacaacgtaacatggcccttttcttt
tctggcggggagagaaaagagcttaaactacgagtaactggaagaatatggaaagaacag
cagaatcctgatggaggagcatgcatgccgaatctctgtacttaa
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