Nicotiana sylvestris (wood tobacco): 104210757
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Entry
104210757 CDS
T05026
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
nsy04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104210757
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104210757
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nsy01009
]
104210757
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104210757
03036 Chromosome and associated proteins [BR:
nsy03036
]
104210757
Protein phosphatases and associated proteins [BR:
nsy01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104210757
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104210757
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104210757
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
104210757
NCBI-ProteinID:
XP_009758020
UniProt:
A0A1U7V8A8
LinkDB
All DBs
Position
6:complement(208583066..208594050)
Genome browser
AA seq
513 aa
AA seq
DB search
MNGGDVATEAPAPPLEWKFSQVFGERAAGEEVQEVDIISAIEFDKTGDHLATGDRGGRVV
LFERTDTKEHAGSRRELERMDYPVTRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRW
CHMPNGALFLLSTNDKTIKFWKVEEKKVKKISNLNIDPSRAIANGSMPSSSVSSSQKKYL
ANGCYTDGSSDCLSNDFSFPPGGLPALHLPVVVSSSESSVAAKCRRVYAHAHDYHINSIS
NNCDGETFISADDLRINLWNLQISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAY
SSSKGSIRLVDLRQSALCDSHSKLFEEKEAPGSRSFFTEIIASISDIKFAKAGRYILSRD
YMTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSN
LFRVFGCAAGNTEATTLEASKNPMRRQVQTPSRPSRSLSSSITRVVRRGAESPAVDANGN
SFDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgttgcaacagaagctccggcaccgccgttagagtggaaattctct
caggtctttggtgagcgtgcggccggcgaagaagttcaggaagttgatatcatctcagca
attgagtttgacaaaactggcgaccatcttgccactggggatcgagggggtagggtggta
ttatttgaaaggaccgatacaaaggagcatgctggaagccgaagagaattagagagaatg
gactatccagtcacccggcatccagagttccgctacaagacagaatttcaaagccacgag
cctgagtttgattatctgaagagtttggagattgaggagaagatcaacaagatccggtgg
tgccatatgcctaatggcgctctctttcttttgtctactaatgacaaaactataaagttc
tggaaggtcgaagagaagaaagtcaagaaaatatccaacttaaatattgacccttccaga
gctattgcaaatggcagcatgcccagttcaagtgtttcttccagtcaaaaaaagtatctt
gcaaatgggtgctacacagatggatcttccgactgtctaagcaatgatttttcgtttcca
cctgggggtcttcctgcattacatttacctgtggtagtttcaagcagtgagagcagcgtt
gctgctaaatgtagaagagtatatgcccatgcacatgactatcatataaattctatctca
aataactgtgatggggaaacatttatatcagctgatgatctccggataaacctttggaac
ttgcaaataagcaatcaaagtttcaatattgttgatgtcaagccagcaaatatggaagat
ctaactgaggtgataacttcagctgaatttcaccctactcactgtaacatgttggcttat
agtagttcaaaaggatcaatccgtctggtagatttgcggcaatcagcattgtgcgactcc
cattctaaattgtttgaagaaaaggaagctcctggctcaagatccttttttaccgagata
attgcttcaatttcagatataaaatttgcgaaggctggaagatacatacttagtcgtgac
tatatgacccttaagctttgggatataaatatggattctggtccagtttcaacttttcag
gttcatgaatatttgagaccaaagttatgtgatttatacgagaatgattccatctttgat
aaattcgaatgttgccttagcggtgacggtttgcgagtagcaactggatcttatagcaac
cttttccgtgtgtttggttgtgctgcggggaacacggaagcaactacattagaagcaagc
aaaaaccccatgagaagacaagtccagaccccttcgaggccttccagatccttgagcagc
agtataacgcgtgttgtcaggagaggagcagaaagtccagcagttgatgctaatggaaac
tcatttgatttcacaaccaaactgctccatctcgcatggcatccatctgaaaattcaatt
gcatgtgctgctgcaaacagcttgtatatgtactatgcataa
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