KEGG   Nicotiana sylvestris (wood tobacco): 104211074
Entry
104211074         CDS       T05026                                 
Name
(RefSeq) RNA-binding protein Y14A-like
  KO
K12876  RNA-binding protein 8A
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013  Nucleocytoplasmic transport
nsy03015  mRNA surveillance pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104211074
  09122 Translation
   03013 Nucleocytoplasmic transport
    104211074
   03015 mRNA surveillance pathway
    104211074
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104211074
   03041 Spliceosome [BR:nsy03041]
    104211074
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104211074
Spliceosome [BR:nsy03041]
 Complex C
  Other components
   EJC/TREX
    104211074
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 YflT
Other DBs
NCBI-GeneID: 104211074
NCBI-ProteinID: XP_009758375
UniProt: A0A1U7V979
LinkDB
Position
4:complement(104982642..104988705)
AA seq 195 aa
MANAEVEAVDFEPEDDDLMDEDVDASSSPRATIPKLKSAITGGSSSAPKKTKGRGFREEA
AEADRNARMSARFDSLDSDGGPGPERSIEGWIVLVTGVNEETQEDDLHNEFGEFGEIKNV
HLNLDRRTGFVKGYALIEYENFEEAQRAINEKDGAEFLTQTIHVDWAFSRGPFKRRNARR
RSPRGHRSRSPRRRF
NT seq 588 nt   +upstreamnt  +downstreamnt
atggcgaatgcggaggtagaggcggtggatttcgagccagaggatgacgatctgatggac
gaagacgtggatgcctcgtcgtctcctagggctacaatccctaagctcaaatctgcaatc
actggcggctcttcctccgcacctaagaagaccaaaggacgtggattccgtgaagaagcc
gctgaggctgaccgtaatgcccgtatgtctgcccgcttcgattcgctcgattctgacggc
ggtcctggtcctgaacgatccattgaaggatggattgttttagttactggggttaatgaa
gaaacacaagaagatgatcttcataatgagtttggtgagttcggagaaatcaagaatgtg
catttgaatctggatcgtcggactggatttgtcaagggctatgcattgatagaatatgag
aattttgaagaagcacaaagagctataaatgaaaaggatggagccgagtttctcactcag
actatacatgttgattgggcattcagcagaggtcctttcaagaggaggaatgctaggagg
agatcaccgcgtggccatcgttctagaagtcccaggcggagattctaa

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