Nicotiana sylvestris (wood tobacco): 104211108
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Entry
104211108 CDS
T05026
Name
(RefSeq) probable E3 ubiquitin-protein ligase ZFP1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104211108
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104211108
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104211108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_16
PHD
PHD_NSD
zf-RING_Vps41
PHDvar_NSD
Hmr1_E-cad-like
zf-RING_10
IBR_1
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
104211108
NCBI-ProteinID:
XP_009758406
UniProt:
A0A1U7UQM2
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Position
8:complement(3621763..3630429)
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AA seq
535 aa
AA seq
DB search
MSYSNQITDLEADQRSQDVHPEPCAFYRSLTTFPQPNVHAILPAPGNAGNFYLHHPQDCQ
EGALIYGMSQYNGVQYQHPASNFDPAIASSTNHYNHYVAAPSASRDLQVAVNHGQHEWLP
FSSTQGTFGINVDSYGRNNIYGDSVRGLFKRKNAEGIPVNFQYQHALVGSSSSLAPMGAA
SFIPPEYRGNDSSSFIEDGALRSVRDISGASGPDNVLGHNNNDLLQGNYVGQACQFPGNY
WSGLQFNSTARETESWAWNRSARLPYLPGDTRGCEDGGNFSMRGYQVTAGNGGLTSFVHP
SVPQGHPNLRHLPPNVQGVRPHIITLPPQMTASSHRHLPSSSLNSSINPFALVEAGPRYI
RPFPPTGFRLYRPQRGEFMHETNVRNHNLPNMRVLPEDGVAMLDIPGYHAVSDPADQHGE
MRMDVDHMSYEELLALGEQIGTVKTGLSEEVIVSHLKTRSFSSSVTPCNLERAACSDSKT
DFCVICQSNYDDQESIGTLKCGHEYHADCVKKWLIMKNNCPICKSTALLTEGKDL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatagtaatcaaataactgatttggaagcagaccagcgaagtcaagatgtccat
ccggagccttgtgctttttaccggagcttaacaacttttccgcagcctaatgtccacgca
atattaccagcccctggaaatgctggtaatttctatttgcaccatccacaagactgtcaa
gagggtgcattaatttatgggatgtcgcagtacaatggggttcaatatcaacatcctgcc
tccaatttcgacccagccattgcttcatcgacaaatcattataaccattacgtagctgct
ccatctgcttctagagatctccaggttgcagtaaaccatgggcaacatgagtggcttcca
ttttcaagcactcaaggcacctttggaattaatgtagacagttatggaaggaacaatatt
tatggcgacagtgtcagaggcttgtttaagagaaagaatgctgaagggattcccgtgaat
tttcagtatcagcatgccttggtaggctccagttcttctcttgccccaatgggtgctgca
tcgtttataccacctgagtacagaggaaatgactcatcatcattcatcgaagatggagca
ctgagaagtgtgagggacatatctggtgctagtggtccagataatgtattaggacacaac
aacaatgatctgcttcaaggaaactatgtcggccaagcctgtcaatttcctggaaattat
tggtcaggcttgcagttcaacagcaccgctagagagactgaatcttgggcctggaatcgt
agtgctcgtctaccttatctgcctggtgatactcgaggttgtgaagatggtggaaacttc
agtatgcgaggttatcaagtaacagccggcaacggaggtttgactagttttgtgcaccca
tccgttcctcaagggcacccaaaccttcgtcatttgcccccaaatgtccaaggagtgagg
ccccacattatcaccctccctccacaaatgactgcttcttcacacagacacctcccaagt
agctcgttgaacagctctatcaatccattcgcccttgtggaagcagggcctagatatatt
agaccattcccaccgactgggtttagattgtacaggcctcaacgaggagaatttatgcat
gaaacaaatgttagaaatcacaacctacctaacatgagagttcttcctgaagatggagtg
gcaatgttggatattcctggctaccatgcagtgagtgatcctgctgatcagcatggagag
atgcgtatggacgtagatcacatgtcttatgaggagcttcttgcattgggagagcagatc
ggcactgtaaaaaccgggttatcagaggaggtcattgttagccatttgaaaacaagatca
ttttcatcatcggtaactccttgcaatttggaaagggctgcatgttcagatagcaagact
gatttctgtgtcatatgccagtctaattacgatgatcaagagagcatcgggacactcaag
tgcggacatgagtatcatgcagattgcgtaaagaaatggttgattatgaagaacaattgt
cccatctgcaagtccacagcattgttgacggaaggaaaggatttgtga
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integrated database retrieval system
