Nicotiana sylvestris (wood tobacco): 104211120
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Entry
104211120 CDS
T05026
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104211120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104211120
03110 Chaperones and folding catalysts [BR:
nsy03110
]
104211120
03029 Mitochondrial biogenesis [BR:
nsy03029
]
104211120
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsy04147
]
104211120
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104211120
Messenger RNA biogenesis [BR:
nsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104211120
Chaperones and folding catalysts [BR:
nsy03110
]
Heat shock proteins
HSP60 / Chaperonin
104211120
Mitochondrial biogenesis [BR:
nsy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104211120
Exosome [BR:
nsy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104211120
Exosomal proteins of other body fluids (saliva and urine)
104211120
Exosomal proteins of breast cancer cells
104211120
Exosomal proteins of colorectal cancer cells
104211120
Exosomal proteins of bladder cancer cells
104211120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104211120
NCBI-ProteinID:
XP_009758421
UniProt:
A0A1U7V0A8
LinkDB
All DBs
Position
5:complement(5973859..5979385)
Genome browser
AA seq
573 aa
AA seq
DB search
MYRFAAKLASKASVARNSSHQVGSRLNWSRNYAAKDVKFGVEARGLMLQGVEQLADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKIKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFAEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNEK
NQKCELDDPLILIHEKKISSINAIVKVLELALKRQRPLLIVSEDVESEILATLILNKLRA
GIKVCAIKAPGFGENRKANLQDLAALTGGQVITEELGLNLENVELDMLGKCKKVTISKDD
TVVLDGAGEKKAIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKVGGASELEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELDNLPTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQDDPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVVELPKDETPSPPMPGGGMGY
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgttttgcagctaaacttgcttctaaagccagtgttgccagaaacagcagccac
caggtgggtagtaggttgaattggagcagaaattatgcagccaaggatgttaaatttgga
gttgaagctcggggcttgatgcttcagggcgttgagcagcttgctgatgcagttaaagtc
accatgggtccaaagggccgtaatgtggtgattgaacaaagttggggtgcacccaaggta
acaaaagatggtgtgactgttgcaaaaagcatcgaattcaaggacaaaattaaaaatgtt
ggtgccagccttgtaaaacaggttgccaatgccactaatgatgttgctggtgatggtacc
acttgtgcaacagtcctcacccgagcaatatttgctgaagggtgcaagtctgtcgcagct
ggaatgaatgcaatggaccttagacggggtatcacaatggctgtggatgctgttgtaaca
aacctgaaaagcagagcacggatgataagcacatccgaggagattgcccaggttgggaca
atctctgcaaatggagaaagagaaattggtgagctaattgcaaaggctatggagaaagta
ggcaaggaaggtgtcatcactattcaagacggaaagacattgtttaatgagttggaagtt
gttgaggggatgaagctggacaggggctacatatctccatactttatcacgaatgagaag
aatcagaaatgtgagctggatgacccacttattcttattcacgagaaaaaaatctcaagc
ataaatgctattgtgaaagtgttagaattggctttgaagagacaaaggcccctcttaatt
gtgtccgaagatgtggagagtgaaatacttgctacacttattctgaacaagcttcgtgct
ggaatcaaggtttgtgccatcaaagctccaggatttggtgaaaacaggaaggctaatttg
caagatcttgctgctttaactggaggccaggtcataactgaagaacttggattgaatctt
gagaatgtggagttggacatgctgggaaaatgtaaaaaggtgactatctccaaggatgac
accgtcgttcttgatggtgctggtgagaagaaggccattgaggagagatgtgaacagatc
agatcagcaattgaactgagcacatctgattatgacaaggagaaattgcaggaaagacta
gctaagctttcaggtggtgttgcagtattgaaggtcggaggagctagtgaacttgaggtt
ggtgagaagaaagacagagttacagatgctttgaatgccacaaaggctgctgtagaggaa
ggaattgttccaggtggcggtgttgcacttctttatgcatcaaaagaattggataacttg
ccaacagccaactttgaccagaagattggtgtccaaattattcagaatgctttgaagaca
ccagtacatacaattgcctctaatgctggggtggagggtgctgtagtggttggtaaactg
ttggagcaggacgaccctgatcttggatatgatgcggcaaaaggtgaatatgttgatatg
gtaaaatcagggatcattgaccctttgaaagtaattaggaccgccctagttgatgctgct
agtgtgtcatctctattgactacaactgaagctgttgttgttgagcttcccaaggacgag
acgccatctccacctatgcctggtggtggtatgggctactaa
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