Nicotiana sylvestris (wood tobacco): 104211500
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Entry
104211500 CDS
T05026
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial isoform X1
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsy03016
]
104211500
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
104211500
Transfer RNA biogenesis [BR:
nsy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
104211500
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Motif
Pfam:
RNB
CSD_RNase_II
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-GeneID:
104211500
NCBI-ProteinID:
XP_009758862
UniProt:
A0A1U7US00
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Position
7:150296300..150308644
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AA seq
808 aa
AA seq
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MALRAMNSCVIFRSAATPPLAASRRCCVRQFTTSRSRKHLNLHSFLRCTPYPLSHVTVRS
YSVHNLVEMVMEELASIRKRGRVRATSKLELASTGELLEDKLKKGTLQKGLLLEFKKDSE
RVLLAVALKPDGKKNWMVSDQNGITTSIKPQQVTFIVPGAENFEPTEISDFVQKAQDNLD
TALLEFAWNELVEKNKSVTVQELAEMIFGSAEPLESYCAHLLLSRDEVYFTVLESKGLSP
VYGPRTATQVGELLRRKLAKETAEKEFEELIQLLRSAKKMPPQDKPPRSSWKTEEKIWHK
IESLEAFAIDACKNDDQKRTAGMILKAMGLAKTSSAAVNLLIDIGYFPVHVNLDLLKLNI
PTDHREEILSVADSILSSSPDLDELLEPRVYRKQPLYLLKADRVDLTHLKVYAIDVDEAD
ELDDALSATRLQDGRIKVWIHVADPTSLLQPGSIIDKDARRRGTSIFLPTATYSMFPERL
AMEGMSLKQGKLCNAVTVSVVLRSDGSIAEYSVENSIIKPTYMLTYESATELLHLNLEEE
IELKILSEAAALRLRWRREQGAIDTGTLETRIKVTNPDHPEPSIKLYVENQADAAMRLVS
EMMILCGEVIATYGSHNNIPLPYRGQPQSNIDTSAFEHLPEGPVRSSAIVRIMRAAEMDF
RNPVRHGVLGLPGYVQFTSPIRRYMDLAAHYQVKAFLRGDSLPFSAGELEGIASTVNMTT
RVVRRLSSSSLRYWILEYLRRQPKGKRFRALVLRFIKDRIAAILLTEIGVQASSWVSLGV
QIGDEVDVQVEEAHPRDDVLSLKEVEAV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcgcgccatgaacagctgcgtaattttccgttccgccgcaacgccaccgctc
gccgcctcacgcagatgctgtgtccgtcaattcaccacctcccgaagtagaaagcatttg
aatttacattcatttctccgttgtacgccttatcctcttagccacgtcactgttcggagc
tattcagttcacaacctcgtcgaaatggtcatggaagagctcgcatccattcgcaaacgt
ggcagagttcgtgctactagcaagctggaattagcaagcacaggagaacttcttgaggac
aagttgaaaaaaggaacactacagaaaggactactgctggagttcaagaaggattctgaa
agggtgttgctagcagttgctcttaaacctgatggcaaaaagaattggatggtctctgat
cagaatgggattacgacctccattaagccacagcaagtaacttttattgttcctggtgct
gaaaactttgagcccacagaaatatcagattttgttcagaaagctcaggataacttggac
acagcactacttgaatttgcatggaatgagcttgtggagaaaaataaatccgtaacagtt
caggaactggctgagatgatttttggtagtgcggagcctcttgaaagctattgtgcacac
ctactgttatcgagagatgaggtgtatttcacagttctggagtcaaaaggtctttctcct
gtatatggacctcggactgctacccaggtgggcgaacttttgcgaaggaagcttgctaaa
gagactgcagagaaggagtttgaggaacttatacagttactgcgatctgctaaaaaaatg
cctcctcaggataaaccgccaagatcttcctggaagactgaagagaaaatctggcacaaa
attgagtctcttgaagcttttgccattgatgcttgcaaaaacgatgatcaaaagagaaca
gctgggatgattttgaaggccatgggattggcgaagacctcatctgcagcagtgaatctc
ctcatagatatagggtattttcctgtacatgtaaatcttgatttgttaaagttaaacatc
cctactgatcatcgagaagagattctgtcggtcgcagatagtattttgtcttcatcacca
gaccttgatgagttacttgagccgagggtctaccggaaacagcctctataccttctcaag
gctgatagagtagacctgactcacctgaaggtttacgcgattgatgttgatgaggctgat
gagcttgatgatgcattgagtgcaacaaggctgcaggatggccggattaaagtttggata
catgttgcagatccaactagtttacttcagccaggaagtataatagacaaagatgccaga
agaagaggaacttctatattcttgcctactgcaacatattcgatgtttcctgaaaggttg
gccatggaaggcatgagtctgaaacaaggaaagctgtgtaatgctgtcactgtgtctgtt
gtgctgcgttctgatggcagcattgcagaatattcggtggaaaactcaatcatcaagcca
acatatatgttaacctatgagagtgcaacagagctccttcatttgaatctggaagaagag
attgaactaaaaattctttctgaagcagctgcactccggttaagatggcgtcgagaacag
ggtgctatagacacaggcaccttagaaacacgaattaaggtgaccaatccagatcatcca
gagccatcaatcaagttgtatgttgaaaaccaggctgatgcagctatgaggcttgtttct
gagatgatgatactctgtggggaagttatagccacttatggttctcataacaacattcct
ttaccatacagaggacagcctcaatctaatatcgacacatctgcatttgaacaccttcct
gagggacctgtcaggagttctgctattgttcgaattatgcgtgcagctgaaatggatttc
aggaatcctgtacgccatggcgtgttgggacttccaggctatgttcagtttacctcccct
atccgaagatatatggatctcgcagcccattaccaggtaaaagcctttcttagaggtgat
tctcttcccttctcagctggggagctggaaggcattgcgtctacagtaaacatgacaacc
agagttgtaaggaggctctccagcagcagtcttcgttattggatactggagtacttgaga
aggcaaccgaaagggaaacggtttcgcgccctggtccttagattcatcaaagatcgaata
gccgcaatactgttgacggagattggagttcaagcgtcttcttgggtgtctcttggtgta
caaattggtgatgaagtagatgttcaagttgaagaagctcatccgcgtgatgacgttctc
tctcttaaggaggttgaggcggtatag
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