Nicotiana sylvestris (wood tobacco): 104212519
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Entry
104212519 CDS
T05026
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104212519
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
104212519
REST complex
104212519
Heterochromatin formation proteins
Other heterochromatin formation proteins
104212519
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
104212519
NCBI-ProteinID:
XP_009760142
UniProt:
A0A1U7UVS9
LinkDB
All DBs
Position
2:125180820..125192380
Genome browser
AA seq
1358 aa
AA seq
DB search
MKRLRDDVYANPQFKRPFGSSRGESYGQSQVPGSGAGGGGNSVGGTGGGVGTSASTQKLT
TNDALSYLKEVKDMFQDQREKYDLFLDVMKDFKAQRIDTSGVIARVKDLFKGHPNLILGF
NTFLPKGYEITLTEEEEAPPKKTVEFEEAISFVNKIKKRFQNDDHVYKSFLDILNMYRKE
HKGITEVYQEVAALFEDHPDLLDEFTRFLPDSSATASATQTSLGRPSFHRYDERSSATLL
RQPHTDKQRFRRDRIISPHAERDPSAERPEMDDDKSMIKLHKEQKRRAEKENRDRRSRDQ
DYREPDNENNGDISMLRIADKRKSARKVEEFGGTYDDKDGVKNMYSQEFTFCERVKERLR
SPTDYQAFLKCLHIYSTEIISRKELQSLVADLLGKHPDLMEGFYEFLERCERIDGYLAGV
MSNKSLWNEGHTSKSVKEEEKDKEQKREIDGGKEKDRYKEKYWGKSIQELDLSNCKRCTP
SYRLLPEDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDR
FELDMLLESVSSTAKRAEELLNALNDNSVGVDGPIRIEDHFTALNLRCIERLYGDHGLDV
MDILRKNPPLALPVVFTRLKQKQEEWTKCRSDFNRVWAEIYSKNHYKSLDHRSFYFKQQD
SKNLSTKSLVAEIKEIKEKKQKEDDMILAIAAGSRRPISPHLEFEFADSDVHEDMYKLIK
YSCEEVCSTEEQLNKVLRLWTTFLEPIFGVPYRHHGSEATGDDVLSKYHGLKSNGTSIGE
SDRSPSADVTTTKSKQSKDICNGDANSSPQRLNSSRAIFTNTDACPKEDGLAVAGERLLS
SDAVSALGADNACARLESTSGRGTRPGNDAAEDGLGAKSNTDNVPISEGGTSRSLPLANG
GFAEGSRIDGFNADSVDPSKNEKEEGELSPNQDFEQDNFVGFRDGAACKGNMQYQSGGAE
MVGCQDTAGENDADADVEDSENVSEAGDVSGSESAADECSREEHEEEDDGEHDELDGKVE
SEGEAEGTSEANFVGGDATVLQMSERFLLTSKPLAKHVVSPHCGGAKNDLRVFYGNDDFY
VLFRLHQNLYERLLSAKLNAASSESKWRTGEDTGSDPYARFMSALYSLLDGSADNAKFED
DCRSIIGNQSYVLFTLDKLIYKLVKQLQTVSSDELDGKLLQLYEYERSRKPEKYVDSVYY
ENAHVLLHEENIYRFESTSSPTRVSIQFMDDGSEKSEVVAVYVDPNFAGYLYNDYLSVEH
GKKESSAVMLKRSVSRNKRKHTDHDVSSALCMVMENIILVNGLECKMASNSSKISYVLDT
EDFFYRLGRKRKKISAGRLLWHGQARVARFHRVLTSSL
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattacgggatgatgtttatgctaatcctcaattcaagcgcccatttggttct
tctcgtggagaatcatacggccaatcacaggttcctggaagtggcgctggcggcggaggc
aatagtgttggcggtactggagggggtgttggtaccagtgctagcacccaaaagttgaca
actaatgatgcattgtcttatttgaaggaagttaaggacatgtttcaagaccaaagggag
aagtatgacttgttccttgatgttatgaaagactttaaggctcaaagaattgacacttcc
ggtgtcatagcaagagtaaaagatttgtttaaagggcatccaaatttgatccttgggttc
aatactttcttgcccaagggctatgaaataaccctcactgaagaagaggaggctcctcca
aagaaaacagttgagtttgaagaagctatcagctttgtgaacaaaataaagaaacgtttc
caaaatgatgatcacgtgtacaagtctttcttagacattttgaacatgtataggaaggaa
cacaagggcattactgaggtgtaccaggaggttgcagcactttttgaagaccatcctgat
ttgctggatgagttcacgagattcttgccagattcttcagctactgcatcagcaacacag
acttcattgggccgaccttctttccatcgttatgatgagaggagctctgctacattgctt
cggcaaccacacacggacaagcaacgtttccgccgggataggattatcagtcctcatgca
gaacgtgatcctagtgctgaacgccctgagatggacgatgataaatcaatgataaagttg
cataaagagcaaaagaggcgtgctgaaaaagagaacagggaccgcagaagtcgcgatcag
gattatagagaacctgataatgagaataatggagatataagcatgctccgcattgctgat
aaaagaaaatctgctcggaaggttgaagagttcggaggcacttacgatgataaagatggc
gtgaaaaatatgtatagccaagagttcactttctgtgaaagagtaaaggagagactacgc
agtccaactgattaccaggcattcctaaagtgcctccatatttatagtacagaaataatt
agcagaaaggagttacaaagtttggttgctgatttacttggaaagcatcctgatcttatg
gagggattctatgaattcttggagcgctgtgaacgaattgatggatatctcgcaggtgtt
atgagcaacaaatctttgtggaatgaagggcatacatcaaagtcagtgaaggaggaggag
aaagacaaagaacagaagcgtgaaattgatggaggtaaagaaaaggaccggtacaaggag
aaatactggggaaagtccattcaagagcttgacctttcgaactgtaagcgctgcactccc
agttatcgacttcttcctgaagattatccgatacctacagcgagccaaaggtcagagctc
ggggctcaagtgttaaatgatcattgggtatctgtgacctcaggaagtgaggactactct
tttaagcacatgcgcagaaaccagtatgaagaaagcctgtttcgatgtgaagatgatagg
tttgagctagacatgttattggagtcagtgagttcaactgctaagcgtgcagaagagttg
ttgaatgcccttaatgataattcagttggtgtggatggcccaatccgcatcgaagaccac
ttcacagcactgaatttaaggtgcattgaacgtctctatggtgaccatggcctggatgtg
atggacattttgcggaaaaacccacctcttgctctgcctgttgtatttacccgcttgaag
cagaaacaggaggagtggacgaagtgtcgctcagacttcaacagagtttgggctgaaatt
tattctaagaaccattacaagtcgcttgaccaccgaagtttctatttcaagcaacaagat
tcaaagaaccttagcacaaaatccttagtagcggagatcaaagaaattaaggagaaaaag
cagaaagaagatgacatgattcttgctattgccgctggtagtagacgtccaataagccct
catcttgaatttgaatttgctgattctgatgttcacgaagacatgtacaaacttatcaag
tattcttgtgaagaggtttgttccacagaagagcagttaaataaagttctgaggctgtgg
accacctttcttgagccaatctttggtgttccttatcgtcatcatggctctgaggctact
ggcgacgatgtcttgtcaaagtatcatggtttgaagagcaatggaacaagcattggcgaa
agtgatagaagtccaagtgcagatgttaccactactaagtctaagcaatcaaaagatatc
tgcaacggagatgcaaattcttcccctcaacgactaaattcttccagggcaatcttcact
aatacagatgcttgccccaaggaagatggattagcagtagctggtgaacgcttacttagt
tctgatgcagtttctgccctcggagcagataatgcttgtgcaagattggaaagtacttca
ggccgcggcacacgacctggtaatgacgctgctgaggatggcctaggagcgaagtctaat
actgataatgtgccaatttcagagggtggcacttcaagatcactacccttggcaaatggc
ggatttgctgaaggttctagaattgatgggtttaatgctgattctgttgatccctctaaa
aatgagaaagaagaaggtgagttgtcgcctaatcaggattttgaacaggacaattttgtt
ggctttcgagatggtgccgcatgcaaaggaaatatgcaatatcaatctggaggtgctgaa
atggttggttgtcaggatactgctggtgaaaacgatgcagatgctgacgttgaagatagt
gaaaatgtttccgaggccggagatgtttcaggtagtgagtctgctgctgatgagtgctct
cgggaggagcatgaggaagaagacgatggagaacatgacgagcttgatggtaaagttgag
agtgaaggtgaggctgagggcacgagtgaagcaaactttgttggaggtgatgccactgtg
cttcaaatgtctgaacgtttcttgcttacttcaaagcctcttgctaaacatgtggtttca
cctcattgtgggggtgcaaagaacgaccttcgagtcttttatggaaatgacgacttttat
gtgctttttaggcttcatcagaatttgtatgaaaggttattatcggcaaagctgaatgca
gcatcatctgaatcaaagtggagaactggagaggatactggttctgatccatatgccaga
ttcatgagtgcactgtatagtttgctagatggatctgcagataatgcaaagtttgaggat
gattgccgatcaatcattgggaatcagtcttatgtgctatttactttggacaaactgata
tataaactggtcaagcagcttcaaactgtttcaagtgatgagctagacggtaagctgctt
cagttatatgaatatgaaaggtcacggaaacctgagaagtatgtcgattcagtttattac
gaaaatgctcatgtcctcctccatgaggagaacatttaccggtttgaaagtacatcttcc
ccaactcgtgtgtctatccagttcatggatgatggaagtgagaagtctgaagttgttgca
gtttatgtagaccccaattttgctggttatctatataatgattatctatctgttgaacat
gggaagaaagaatcgtcagcagttatgctgaagagatctgtgagcagaaacaagagaaaa
catactgaccatgacgtatcttctgccctgtgcatggtgatggaaaatattatactcgta
aatggcttggagtgtaagatggcttcaaattcatcaaagatttcttacgtactggacaca
gaggacttcttttaccgtcttggaaggaaaagaaaaaagatttcggctggcagattattg
tggcatggccaggcgagagtagcacgcttccaccgtgttttgacatcctcgttatga
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