KEGG   Nicotiana sylvestris (wood tobacco): 104212589
Entry
104212589         CDS       T05026                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104212589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104212589
   03041 Spliceosome [BR:nsy03041]
    104212589
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104212589
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104212589
Spliceosome [BR:nsy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104212589
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 104212589
NCBI-ProteinID: XP_009760192
UniProt: A0A1U7UVX8
LinkDB
Position
6:complement(38491297..38498210)
AA seq 454 aa
MDLLKKRKLEDNGVITDVPVTSRLTIEDARKILESVTPEQMLEILQTAVVRHADVLDQVR
VIADRDTTQRKLFIRGLGWETNTEKLKAIFGNYGELEEAVVINDKATGKSKGYGFVTFKH
VDGALLALKEPSKKIDGRMAVTQLASAGIQGGPGGGSTNNPVDVSARKIYVANVPYDMQA
ERILQHFCMYGEIEEGPLGFDKATGKSKGYALFVYKTAEAAKASLVDPVKNIDGHQLNCK
LAIDGKKGGKPGGGAQAQTDGHVDQVGPGQYGGPSGITGYGGFPGHSTFGGPGGHGPNSA
YGSGNGIGVGGPGGGSSYGGSQPGGSVSGGGYGGLYGGGGGSHYGGPGSAGYGALASSAT
GGGGGYGGPGALGGGGYGSTGALGGGGLSGVGGALGGAGRGSSMYGLPPSSTGLASGDYP
PQGPHYSQQNQVPGVSPAPRVAPGGMYQGMHSYY
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggaccttttgaagaaacgaaagctcgaggataacggcgttatcaccgacgtccccgtt
accagtagactcacaatcgaagacgcacggaagattctagaatcagtcacccccgaacaa
atgctcgaaatcctacaaaccgctgttgtacgtcacgccgacgttttagaccaagtacga
gtaattgccgatcgcgacaccactcaacggaagctcttcattcgcggactcggctgggaa
acgaatacggaaaaacttaaagcaattttcggaaattacggcgagttagaagaagccgtc
gtaattaacgataaagccactggtaaaagcaaaggttacgggttcgttacgtttaagcat
gttgatggagctttacttgctttgaaggagccgagtaagaagatcgatggacgaatggca
gtgactcagctcgcgtcagctgggattcaaggtgggcctggtggcgggagtaccaataat
ccggttgatgtgtcggcgaggaagatttatgtagcgaatgtgccgtatgatatgcaggcc
gagaggattttacagcatttttgtatgtatggggaaatagaggaagggccattagggttt
gataaggcgactgggaagtcgaaagggtatgctttgtttgtgtataagacggcggaggcg
gctaaggcttcgctagtggatcctgttaagaatattgatgggcatcagttgaattgtaag
ctagctattgatgggaagaaaggggggaagcctggaggaggagctcaggctcaaactgat
ggtcatgttgatcaggttggcccgggccagtatggtgggcctagtgggattactggttat
ggtggatttccagggcattcaacctttggtggacccggcggacatgggcccaattcagca
tacggtagtgggaatggtataggtgtgggtggccccggtggtggttcatcttatggtggg
agccaacctgggggttctgttagtggtggtgggtatggtggtctatatggtggaggtggg
ggatctcattatggtggacctggttcagctggatatggcgcgttggccagtagtgctact
ggtggtggtggtggatatggcggtcctggggcattgggaggtggtggatatggcagcact
ggggcgctgggaggtggtggattaagtggagttggtggtgcattaggcggtgcaggccgt
ggctcttcaatgtatgggttacccccaagctcaactgggttggcttcaggagattatcca
ccacagggtcctcattacagtcaacaaaaccaagtgcccggggtatcacctgcacctaga
gttgcacctgggggtatgtaccaggggatgcattcatactactga

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