Nicotiana sylvestris (wood tobacco): 104213168
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Entry
104213168 CDS
T05026
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 11-like
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020
RNA polymerase
nsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104213168
09124 Replication and repair
03420 Nucleotide excision repair
104213168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104213168
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104213168
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104213168
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104213168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
Tup_N
Motif
Other DBs
NCBI-GeneID:
104213168
NCBI-ProteinID:
XP_009760910
UniProt:
A0A1U7VGD6
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Position
7:22412377..22419003
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AA seq
116 aa
AA seq
DB search
MNAPDRYERFVVPEGVKKVSYERDTKIINAATFTIEREEHTIGNILRMQLHRDENVLFAG
YKLPHPLQYKILLRIQTTSQSSPMQAYNQAINDLDKELDHLKNQFEGELAKHLRNL
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccagatcgttacgaacgatttgtcgttcctgagggcgttaagaaggtttcg
tacgagagagacacaaagatcataaatgcagcaacattcaccattgaaagagaggaacac
actatcggaaacattcttcgcatgcaactgcatagggatgagaatgtattatttgctggt
tacaagttgcctcatcctcttcagtacaaaatcttgctcaggattcaaacaacaagccag
tcctcacctatgcaggcatataaccaggctataaacgatcttgataaggaacttgatcat
ctaaagaatcagtttgagggcgaattggccaagcacttgaggaacttataa
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