KEGG   Nicotiana sylvestris (wood tobacco): 104213532
Entry
104213532         CDS       T05026                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03010  Ribosome
nsy04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    104213532
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104213532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:nsy03011]
    104213532
   04121 Ubiquitin system [BR:nsy04121]
    104213532
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nsy04147]
    104213532
Ribosome [BR:nsy03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    104213532
  Archaea
    104213532
Ubiquitin system [BR:nsy04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   104213532
Exosome [BR:nsy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104213532
  Exosomal proteins of colorectal cancer cells
   104213532
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD OTU1_UBXL Fer2_3 Ubiquitin_5
Other DBs
NCBI-GeneID: 104213532
NCBI-ProteinID: XP_009761349
UniProt: A0A1U7VG87
LinkDB
Position
9:109335968..109336702
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGAD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctaacgggtaaaacaatcacccttgaggttgaatcttcc
gacacaatcgacaatgtgaaagccaagatccaagataaggaagggattcccccagatcag
cagcgtctgattttcgccggaaagcagcttgaagacggccgaaccctagccgattacaac
atccagaaggagtcgactcttcatctcgtgctccgtctccgtggtggtgctaagaagagg
aagaagaagacttatactaagcctaagaagattaagcacaagaagaagaaggttaagctt
gctgtgcttcagttttacaaggtggatgattctggaaaagtccagaggcttcgtaaggag
tgtcctaatgctgagtgtggtgctggaacttttatggctaaccactttgaccgtcactac
tgtggtaagtgtgggctcacctatgtttacaacaaggccggcgccgattga

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