Nicotiana sylvestris (wood tobacco): 104213867
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Entry
104213867 CDS
T05026
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104213867
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nsy04040
]
104213867
Ion channels [BR:
nsy04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104213867
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Motif
Pfam:
Ion_trans
cNMP_binding
HTH_17
IQ
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
104213867
NCBI-ProteinID:
XP_009761725
UniProt:
A0A1U7VIQ3
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Position
2:4502038..4507901
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AA seq
699 aa
AA seq
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MTRIFETPASHLRHFKQSLKTKSLISSSTDEPQLINRLWRHYILDPNSDIVNRWNYVFLI
TCLISLFIDPLYFYIPYVSENACMATDDEAATQITVYRSLTDVFYFLHIIMKFRTAFVAP
SSRVFGRGELVMDAKEIAIRYLKTDLIVDFTAALPLPQIVIKYVIPAAKRNGSGHSKSTL
ALIVLIQYVPRLFVIFPLNQQIIKTTGFIAKTAWAGAAYNLLLFMLASHVAGASWYVASI
GRQYSCWSNECKKERDAVPPCVPDFLDCTSDTDTYVRDYWRNSTQVLVKCDAINDEDSGF
KFGIFANAFTNEVASSTFMEKYLYCLWWGLRNLSSYGQNLNTSTYIGETLFSISLCIIGL
VLFAQLIGNMQTYLQSMTVKIEEWRIRKRDIEEWMRHRQLPEDLQERVRRFDQCKWLATR
GVNEEDILQSLPLDLRRQIQRHLCLKLVRRVPFFAQMDDQLLDAICERLVSSLSIKGTYV
VREGDPVNEMFFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALVPNTTQLPS
STRTVRTLSEVEAFALRAEDLKFFAVQFKRLHSKKLQHAFRYYSQQWRTWGACLIQAAWR
RYRKKKMETELALQESYYYNQDPNNNYDQNYEAFEDVGLEQPLVGSAHNSQQLGATILAK
RFATNTRRGIEQKIQMTDSSSSLKMPKLFKPDEPDFSAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgactagaatattcgaaacgccggcgtctcacctccgccatttcaagcaatcgctgaag
accaaatccttaatctcctcttcaaccgacgaacctcaattgatcaaccgcttatggcgc
cactatattctcgatccaaacagcgacattgtcaatcgctggaactacgtgttcctcatc
acgtgtttaatctctcttttcatcgatcctctttacttttacatcccttacgtcagcgaa
aacgcttgtatggccactgatgacgaagcggccacacaaattaccgtctatcgttctctt
accgatgtcttttatttcctacatattattatgaagtttcgaacggcttttgtggcgccc
agctcgagggtttttggccggggtgagcttgttatggatgccaaagaaattgcgattcgg
tacctcaagactgatttaattgttgattttactgccgcgcttcccctgcctcaaatcgtc
attaaatatgtaatacccgcagctaaaagaaatggatctggtcactccaaaagtactctt
gctcttatcgttctcatccaatacgtgccaaggttgttcgttatttttccgttaaatcag
cagattatcaaaactacaggttttattgctaaaacagcttgggcaggagcagcttacaat
ctccttcttttcatgttagccagtcatgtggcaggagcttcgtggtatgtggcatctata
ggaagacagtactcttgctggtcgaatgaatgtaagaaggaacgtgatgcagttccaccg
tgcgtgcctgatttcttagattgtacaagtgatacggatacatatgtacgtgattattgg
cgaaacagcacgcaagtgcttgtaaaatgtgatgctataaatgatgaagattctggtttt
aagtttggaattttcgctaacgcctttactaatgaagtggcttcatcaacattcatggag
aaatatttatactgtctttggtggggtctaagaaatttgagttcatatgggcagaatttg
aatactagcacttatattggcgaaacattattcagcatttccctatgcatcattggctta
gttctctttgcacagcttattggaaacatgcagacttatctgcaatctatgaccgtaaaa
attgaggaatggagaattagaaaaagagatatagaagaatggatgaggcaccgacagttg
cctgaagacttgcaagaacgtgttcgccgttttgatcaatgtaaatggcttgctacaaga
ggagttaatgaagaagacatcttgcaatctttgcctttggatcttcgtcgtcaaatccaa
agacacctatgccttaaacttgttcgacgagttccattttttgcacaaatggacgatcag
ctgcttgatgcaatttgcgaacgactagtctcgtccctaagcataaagggtacttatgtt
gttcgagaaggcgatccagttaatgagatgttctttatcatcaggggacaactagagagc
tccacgacaaatgggggaagatctggattcttcaattctatcactcttagacctggtgat
ttctgtggtgaagaattgctgacatgggccttagttcctaatacaacgcaattgccttct
tcaactcgaactgtgagaacactttctgaagttgaagcatttgcacttcgagctgaagac
ctgaaatttttcgcggttcagtttaaacgtcttcacagtaagaagctacaacatgcattc
aggtattattctcaacagtggagaacatggggtgcttgcttaatacaggcggcatggaga
aggtataggaagaaaaagatggaaactgaattggctttacaagagagctattattataat
caagatcctaacaacaattatgatcaaaattatgaggcttttgaagatgttggtcttgag
caaccattggtaggcagtgctcataattcccaacaacttggagctacaattttggctaaa
agatttgctactaatacgagaagaggaatagaacagaagattcagatgactgattcttct
tccagcttaaagatgcccaagttgtttaagccagatgagcctgatttttctgcagaatga
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