Nicotiana sylvestris (wood tobacco): 104214019
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Entry
104214019 CDS
T05026
Name
(RefSeq) RNA-binding protein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104214019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104214019
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104214019
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
104214019
NCBI-ProteinID:
XP_009761915
UniProt:
A0A1U7VJA6
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All DBs
Position
2:143019508..143022163
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AA seq
438 aa
AA seq
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MENTVKQGKIFIGGISWETTEETLRKHFSRYGEVIKSEIPKVWETGFGKGFGFVTFADSS
VFDELLQDQHIILGRTVDVSLARPKGENSQSQRCLECRQTSKSHRKKIFVWGLPQYLSEE
DFKRYFEHFGKIEDAKIIYDRETNTPRGFGFITYDSEEAVTNVLQRRFHVLNNKFVEVKK
AMPKEKRVMDTCTYTSYPTNSGYVLVPVLNSNEIYAPNYNYYMVNPAMVPCQSIPFNYSG
TDMSVSQSAQIQCYTPRHPVNYYASTPNGVDNGGSYEALSNTPRCPVNGYASTPDGVDNK
GSYETLSNAAKCPISTPNGVHSKGFYETLSNAARCQVNCYASASNGVDNGGSSTALSNGV
YNSDVEHQIDVKCSNGSDCGTDKSVSHEGNHQDCNIEVQLVGNVSPPGKSGLFSIRFTCE
FNYSVIKSLKNNSTVNHS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggagaatactgtgaaacaagggaagatttttattggtggaatatcgtgggaaacaact
gaagagacacttagaaagcactttagtcgctatggagaagtgatcaagtcagaaatacct
aaagtttgggagacaggttttggaaaaggctttggttttgttactttcgctgattcttct
gtttttgatgagcttcttcaagaccaacatatcattcttggtagaacggttgatgtttca
ttggcaagacccaaaggtgaaaactctcaaagccaacgttgtttagaatgccgacaaact
agcaaaagtcacaggaagaagatttttgtttggggattgcctcagtatttatctgaggaa
gattttaaacgatactttgagcattttgggaaaattgaagatgcaaaaattatctatgat
agagaaaccaatacgcctaggggatttgggtttatcacctatgattcagaggaagctgta
acaaatgtgttacagaggagatttcacgtgttgaataataaatttgttgaggtaaagaaa
gccatgccaaaggaaaagagagttatggatacttgcacttacacttcttatcctacaaac
tcaggctatgtattggtgccagttttgaatagtaatgagatttatgctcctaattataat
tactatatggtcaatcctgctatggtaccttgtcagagtattccgtttaattattcgggc
acagatatgtcggtctcacagtccgcacagatacagtgctatacgcctagacatccagtc
aactactacgcctcaacgcctaatggagtggacaacgggggttcttacgaggctttatca
aatacgcctaggtgtccagtcaacggctatgcctcaactcctgatggagtggataacaag
ggttcttatgagactttatcaaatgcagctaaatgtccaatctcaacgcctaatggagtg
cacagcaagggtttttacgagactttatcaaatgcggctagatgtcaagtcaactgctat
gcctcagcgtctaatggagtggataacggtggttcttccacggctttatcaaatggtgtt
tataactctgacgttgagcaccagatcgacgtgaaatgtagcaatggtagtgattgtggg
actgataaatctgtttctcatgaagggaatcaccaagattgcaacattgaggttcaactt
gttggaaatgtatcacctccaggtaagagtggtcttttttctattagatttacttgtgag
tttaactacagtgtaatcaagtcacttaaaaataacagtacagttaatcattcataa
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