Nicotiana sylvestris (wood tobacco): 104214062
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Entry
104214062 CDS
T05026
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104214062
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104214062
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
104214062
NCBI-ProteinID:
XP_009761969
UniProt:
A0A1U7VI21
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Position
3:177083650..177087565
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AA seq
434 aa
AA seq
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MEFTKNNLFLFVMVVLVLSIEAHIGEFDEVWRKRAEKAKKAARHAYHPNPKIVADHLNNQ
VDKAVRGSNSRRRDLHRYNGQCKATNPIDQCWRCDPNWARNRMKLADCVLGFGRKTTGGK
GGKIYVVTDNSDSDLVNPKPGTLRHAVIQPQPLWIIFAKNMVIRLNEELIMTSNKTIDAR
GKQVHIAHGGGLMLQFIHNVIISNLRIHDTKAGNGGLIRDSVDHYGYRTKSDGDGISIFG
STNVWIDHVSMSNCQDGLIDAVEASTAITISNSHFTKHNEVMLFGASDSSSRDSIMQITL
AFNHFGQGLMQRMPRVRWGFVHAVNNDYTHWLMYAIGGSMHPTILSQGNRFIAPPNPNAK
EVTKRDYAPESVWKNWVWKSQGDLMMNGAFFVESGNPNHAFLRSPDMISSKPGSFVSSLT
RFSGSLNCIEGKPC
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaattcacaaagaataatttgtttttgtttgttatggttgttctagttcttagcata
gaggcacacattggggagtttgatgaggtgtggcggaagcgagccgagaaagcaaagaag
gccgctcgccatgcctatcatcctaatcctaagattgtagccgatcatcttaacaaccaa
gttgacaaggccgtacggggcagcaatagcagaagaagggacctgcacaggtacaatggt
caatgcaaggcgacgaacccaattgaccagtgctggcggtgcgatccaaactgggctcga
aaccgcatgaaactagcagattgcgtccttggctttggccgcaagacaaccggaggcaaa
ggtggaaaaatctacgtagtaactgacaattccgacagcgatttagttaatcccaagcct
ggaactttacgccacgccgtgatacagccgcagccactttggattatatttgccaagaac
atggtaattaggctaaacgaggagcttattatgaccagcaacaagacaattgacgcccga
ggaaagcaagtgcacattgctcatggtggtggccttatgttacagttcatacacaatgtt
ataattagtaaccttcgcattcatgatactaaggctggtaatggtggcctaattagagac
tccgtcgaccattacggttatcgaacgaaaagtgatggcgatggtatttcaatctttgga
tccacaaatgtttggattgatcacgtctcaatgtccaattgtcaggatggtctcattgat
gctgttgaggcttccactgccattactatttccaacagccatttcactaaacataatgaa
gtcatgttgtttggagccagtgatagctcctcaagggactctattatgcaaataacactt
gctttcaatcactttggacaagggttgatgcagaggatgccaagagtgagatggggattt
gttcatgctgtcaacaatgattacacacattggctaatgtatgctattggaggaagcatg
catcctaccatacttagccagggaaatcgtttcatcgctccccctaatccaaacgccaaa
gaggtgacaaaaagggattatgcacctgagagcgtgtggaagaattgggtatggaaatca
cagggagatcttatgatgaacggggcgttctttgtagaatctggaaatccaaatcatgca
ttcttgaggagtcctgatatgatcagctccaagccaggatcatttgtgagcagcctgaca
cgattttcaggctctctgaactgcattgaggggaagccttgttag
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