Nicotiana sylvestris (wood tobacco): 104214069
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Entry
104214069 CDS
T05026
Name
(RefSeq) sister-chromatid cohesion protein 3 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104214069
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104214069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
SCD
STAG
HEAT_2
GP24_25
Motif
Other DBs
NCBI-GeneID:
104214069
NCBI-ProteinID:
XP_009761976
UniProt:
A0A1U7VAH0
LinkDB
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Position
8:74458435..74482497
Genome browser
AA seq
1119 aa
AA seq
DB search
MEEEPVVSGTANRRTKRTRVQTRVNEEQNVNEEREESSDDFEESRGRAKRSKAVAGTSAA
AAAASRNAHLSLIDVVKGDRRLIPLVVKHWVEHYEKNPKAAIAGLLSMMFEACGVKYHIE
EDFLDQTDVDDVVVALVNMAKRVFSSIIFMRFSYLICLGEVEDYQSSKKKDFNNFKDNLV
YFWDTLVAECENGPLFDKVLFDKCMDYVIALSCTPPRVYRQVASLMGLQLVTSFIHVAKV
LGAQRETTQRQLNAEKKKKVDGPRVESLNKRLSLTHEKITIIEEMMRKIFTGLFMHRYRD
VEPDIRMACIQSLGVWILSYPSLFLQDLYLKYLGWTLNDKSHGVRKASVLALQNLYEVND
NVPSLGLFTERFYKRMIELADDVDISVAVCAIGLVKQLIRHQLVPEEELSSLYDLLIDDP
PDIRRAIGALVYDNLIAQRLNSSQSSSGDNTDSSEVHLSRLLRILREFSKDEMLSMYVID
DIWEYMDAMKDWKCILSMLLEEEPSAELSDVDATNLIRLLAASIRKAVGEKIVPASDNRK
QYYTKAQKEMFESCKRDITVAMMRNYPQLLRKFMSDKAKIPYLLEIIVHMNLELYSLKRQ
DQNFKSAVLLMKEAFFKHGEKEALRSCVKAVGFCATESRGELQDFALNKLKEIEDELIVK
LKSAIKEVVDGDDEYSLLVNLKRLYELQLSRQISIESLYKDFAETLKNFRSIDDEVIGFL
LLNMHLHVCWCLHSIINSGTVPEQSVSSLISKRSTLFKLLESFLTTESPEGLRANHLACR
VCVILSEQWCLFRKATFASTELEVLGYSPDESILQKFWKLGEHQLHISDETEEDDSNREY
IEETNRDAIIIAVAKLVAVEAVPKEYLAPEIVSRFAMHGTSVSEVIKHLLTVLRNKGADV
ACLFLEALKKAYQRYLVVLSSDDDNSARKTFQECEDLASELAKTFGKAAKNKHRSDVLNI
VTGGIQYAFSDAPEHLSFLDGAVLHFISKLPPPDIMDILKDVEKRTENVNMDEDPSGWRP
YHIFVDTVCEKYAKDEGLQDGKEGSAMRRRGRPPKRQNLQGKKLFNKHTSSEDEESICGS
DQDADEEKQDDEEEVPLIQSIKSSSKLRSLKTSKRAEAI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaaccagtggtgtcgggaacggcgaatcgccgtacgaaacgaacgagagtt
caaactagggttaacgaggagcaaaatgtgaatgaggagagagaagaatcgtccgacgat
tttgaagaatctcgtggtagagctaagcggagtaaggctgtagcaggcacttcagctgct
gcggctgctgcttctagaaatgctcatctcagtttaattgatgttgtcaaaggtgatagg
agactaattcctctagtggttaagcattgggtggaacactatgagaagaacccgaaagcc
gcaatagctggactcttgagcatgatgtttgaggcctgcggagtaaaatatcatattgaa
gaagatttcttggaccaaactgatgttgatgatgtagtagttgctcttgtaaacatggct
aagagggtattttcatccatcatattcatgagattttcttacttaatatgtctgggtgaa
gttgaagattatcaaagttcaaaaaagaaggacttcaacaacttcaaagataaccttgtc
tacttctgggatactttggttgctgaatgtgaaaatggaccactttttgataaggtcttg
tttgacaagtgcatggactatgtgattgcactatcgtgcacccctcctagagtatatcgt
caggttgcttcattaatggggctacaacttgttacatcctttatacacgttgccaaagtt
cttggtgcgcagcgcgaaaccactcagaggcagctaaatgctgaaaagaagaagaaagtg
gatgggcctcgagttgaatcactaaataaaagattatccttgacccatgaaaagataaca
ataatagaggagatgatgcggaagatatttaccgggctatttatgcaccgttatcgagat
gtcgaaccagatatcagaatggcatgcatacagtcattgggtgtttggatcctgtcatac
ccctccctgtttttgcaggatttgtatttgaaatatcttggatggacattgaatgataaa
agtcatggtgtaaggaaggcttcagtccttgcactgcaaaatctttatgaggtgaatgat
aatgttccatctcttggccttttcacggagaggttttataaaagaatgatcgagcttgct
gatgatgttgatatttccgtggcagtatgtgctataggacttgtgaaacaactgataaga
catcaacttgttcccgaggaagaattaagttcattatatgatttgctaattgatgatcca
ccagatatcaggcgtgccattggagcactagtgtatgataatctgattgcccagcgattg
aacagttcacaatctagttcaggggataatactgattcttctgaggttcatctgagtaga
ctgctgcgcatattgagagagttctcaaaagacgaaatgctgagcatgtatgtcattgat
gatatctgggagtatatggatgccatgaaagattggaagtgtatcctgtctatgctcttg
gaggaagagccatcagctgaactaagtgatgtagatgcgacaaacctaattcggttgctt
gctgcatcaattagaaaggcagtcggggagaagattgttcctgctagtgataatagaaaa
caatattacactaaagcacaaaaggaaatgtttgaaagttgtaaacgtgatataaccgtt
gctatgatgaggaattatccgcagcttcttcgcaaatttatgtctgacaaagcaaaaatt
ccttatctactcgaaatcattgttcatatgaaccttgagctctattctcttaaaagacaa
gatcagaattttaaatctgctgtccttctgatgaaagaggcattttttaagcatggtgag
aaggaagctctgagatcttgtgtaaaagctgtgggcttctgtgccactgagagtcgaggg
gagttacaggactttgcccttaacaaattaaaggagattgaggatgagctcattgtcaaa
cttaaatctgcaataaaagaagttgtggatggtgatgatgaatattcactgcttgttaat
ttgaaaagattgtatgaacttcaattgtcaaggcaaatttccattgaaagcttgtataaa
gattttgcggagactcttaaaaacttcagaagtattgatgacgaggtaattggatttctg
cttctcaacatgcatctgcatgtttgctggtgcctacactctatcataaactctggcaca
gtccccgagcaatcagtgtcttccttaatttccaagcgcagtaccttgtttaaactactt
gagtccttcctgactactgaatctcctgaaggtcttcgtgcgaatcatcttgcatgtagg
gtttgtgttattctttcagaacaatggtgtctgttcaggaaagcaacctttgcttccact
gagctagaagttttggggtactctccagatgaatccattcttcaaaagttctggaagctt
ggtgaacaccaactacatatttcagatgagactgaagaagatgattctaatagggaatac
attgaggagacaaatcgagatgctataatcattgctgtggcgaagttggttgctgttgag
gcagttcctaaggagtatcttgctccagagatagtatctcgtttcgcgatgcatggaaca
agtgtgtctgaggtcattaagcatttgctaacagtcttaaggaataaaggtgcagatgtt
gcatgtctgttcctagaggcactaaagaaggcatatcaacggtacttagtggtactttct
tctgatgatgacaattcagcaagaaagacatttcaagaatgtgaagatcttgcgagtgag
cttgctaaaacttttggaaaggctgctaaaaacaagcatcgatcagatgttctaaatatt
gtcacaggaggcattcaatatgccttttcagatgctccagaacatttatctttcttagat
ggtgccgtgctgcatttcatatccaaacttcctccgccagatattatggacatcttgaaa
gatgttgagaaaagaactgaaaatgttaatatggatgaagatccaagtggttggcgaccc
tatcatatatttgtagacacagtctgtgagaagtatgcaaaggatgaaggtttacaagat
ggtaaggaaggttcggccatgagacgtcgaggtcgtcctcctaagaggcagaacttacaa
ggaaaaaagctgtttaacaagcacacttctagcgaagacgaggaatcaatctgtggatct
gaccaggacgcagatgaagaaaaacaagatgacgaagaggaggtccctctaatacaatct
attaagtcatcatccaagctaaggtctctgaagacatcaaagagagctgaggccatatga
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