Nicotiana sylvestris (wood tobacco): 104214337
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Entry
104214337 CDS
T05026
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsy03000
]
104214337
Transcription factors [BR:
nsy03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
104214337
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
C2HC_ASCIZ
Motif
Other DBs
NCBI-GeneID:
104214337
NCBI-ProteinID:
XP_009762294
UniProt:
A0A1U7VIX9
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Position
4:complement(27466793..27491582)
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AA seq
505 aa
AA seq
DB search
MNIQQEVFLQQQQYTLAPSSSMAQTQAQATPTKKRRNQPGTTPYPDAEVIALSPKSLMAT
NRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNTKEVVKRKVYLCPEITCVHHEISRA
LGDLTGIKKHYFRKHGEKKFKCEKCSKKYAVQSDWKAHTKTCGTREYRCDCGTLFSRRDS
FITHRAFCVALAQETARNPVPIHNLGNFSKMQNSTILDQKYPSSNSIDILSLGNTKTTHN
QQFNHNLIDTSNIGSNTSNSFFFQESNQDYANIKPIHDLMQQLPNFHNNNMFNLNFFQNN
DGNSNMSSGILGDQNISCSIPSLYGSQVQNHNLNSTTTSSVAPMSATALLQKAAQMGSTT
SNISTTALLLKAFGNSTNGGNSSSSGTKSDHQVVNFGDNFSDHSGNHLHDINGEAKNFGT
PADIVNGVNAYGHDQNDYGGGYNAATKLNFEEQQHQLPPQKKQLTRDFLGVGEIVRSMSG
GFSSQREQQQQQQSNQGFISPENFQ
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcaacaggaagttttccttcaacagcagcagtatactttagctccatcttca
tctatggctcaaactcaagctcaagctacaccaacaaagaagagaagaaatcaacctggc
actacaccatatccagatgcagaagtgatagctttatcacccaagtcactaatggcaaca
aacagattcttatgtgaggtatgcaacaaaggattccaaagggaacaaaacttacaacta
cacagaagaggacacaatttgccttggaaactaaagcagaaaaatacaaaagaagtagta
aaaagaaaggtctatctttgtcctgaaatcacatgtgtacaccatgaaatttccagagca
ttaggtgatctcactggtattaaaaaacattacttcagaaaacatggtgagaagaaattc
aagtgtgagaaatgttccaagaaatatgcagttcagtctgattggaaagctcatacaaaa
acttgtggcactcgtgaatatagatgtgattgtggcactcttttctcaaggcgtgacagt
ttcatcacacatagagccttttgtgttgccttggctcaagaaactgcaagaaatccagta
ccaatacacaatttaggcaacttctccaaaatgcagaattccacaattttagatcaaaaa
tacccttcttctaattccattgatatattgagtttgggaaataccaaaactacccataat
cagcagttcaatcacaacctcattgatacatccaatattggctcaaatactagtaattcc
tttttctttcaagaatccaatcaagattatgccaacattaaaccaatccatgacctaatg
caacaactcccaaattttcacaacaacaatatgtttaacctcaactttttccaaaataat
gatggaaatagcaatatgtcaagtggaattttgggtgatcaaaatattagttgttcaatc
ccttctctttatggttcacaagttcagaaccataatcttaatagtactactacttcttca
gttgcaccaatgtcggccactgcacttcttcaaaaagcagctcaaatgggatctactaca
agtaatattagcactactgccttattgctgaaagcctttggaaatagtactaatggtggt
aattcatcctctagtggcacaaaatctgatcatcaagttgtcaactttggcgacaatttc
agtgaccatagtgggaaccacttgcacgacatcaatggcgaagccaaaaattttggtacg
cccgctgacattgtgaatggtgtcaatgcttatggacatgaccaaaatgactatggagga
ggatacaacgcagcaaccaaattgaactttgaggagcaacagcaccaattaccaccacag
aagaaacagttaactagagatttccttggagttggagaaatagtaagaagtatgagtggg
ggatttagtagccaaagggagcaacaacaacaacaacaaagcaatcagggttttataagt
cctgaaaattttcagtga
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