Nicotiana sylvestris (wood tobacco): 104214475
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Entry
104214475 CDS
T05026
Name
(RefSeq) protein SLOW WALKER 1-like
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104214475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104214475
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104214475
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_NOL10_N
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
DSE1_N
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
PAC11
ASA1
TRM82_WD
Utp13
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_VPS8
Herpes_gp350_A
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
104214475
NCBI-ProteinID:
XP_009762447
UniProt:
A0A1U7V2I3
LinkDB
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Position
4:169059295..169061435
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AA seq
533 aa
AA seq
DB search
MAENQSIARTFPVKPKLKPTSANSTTPTPESKYWRSFKTPKDLQSQTLVSAITSLSVSPI
SPHDFAATHSATVSIFSGQTLEPKTTISSAFKDTVTSASFRSDGCLIAAGDLSGAVQVLD
LKSRVPLRRLRGHTRPVRVVRYPRADKLHLLSGGDDAVVKYWDITTESKIYDLLGHKDYV
RCGDASPVSDDMFVSGSYDHTVKVWDVRVLNSGSVMEFDHGKPVEDVIYLPSGGLVATAG
ANSVKIWDVLGGGKLLYTMESHNKTVTSICVGKIGKESGEEAQQYRILSVSLDGYMKVFD
YAKFRITHSMRFPNPLMSVGFSPDCSTRVIGASNGTMYIGRRKVKDSESLELGGFGGGFA
PLEEPQRRVLRPSYFRYFQRGQNEKPSEWDYLIKKPKKIKVAEHDKLLKKFMHKEALVAA
LSGKNPENVVAVMEELVARKKLLRCVSNLETEELGLLLRFLQRYSTMLRFSRFLMGLTKK
VIEMRTEDIKFSDELRGHIRNLKRDVEEEIRVQQTLQQIQGIVCPLLKIAARR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatcaatccatagcaagaactttcccggtgaagcccaaattaaaacccact
tcagcaaattccactaccccaacccctgaatccaagtattggagatcattcaaaacccct
aaagatcttcaatcccaaaccctagtttctgcaatcacctccctatcagtttccccgata
tcccctcacgatttcgccgccacacattctgccactgtttccattttctccggccaaact
ctcgaacccaaaaccaccatatcctccgccttcaaagacacagtcacctccgcttcattc
cgttccgatggatgtctcatcgccgccggtgacctttcaggcgccgttcaggttcttgac
cttaaatcccgtgtccctctccgtcgtcttcgcggccatacccgacccgttcgtgttgtc
cgttacccacgcgccgataagctccacctgctctccggtggtgatgatgctgttgttaag
tactgggatattactactgagtccaaaatttacgatcttttggggcataaggattatgtg
aggtgtggcgatgcttcaccggttagtgatgatatgtttgtttcgggttcttatgatcat
acggtgaaagtttgggatgttagggttttgaattcgggttctgtgatggagtttgatcat
gggaagcctgttgaggatgtgatttacttgccatccggtgggttagttgctactgctggt
gcgaattctgtgaagatttgggatgttcttggaggtgggaagttgttatatacaatggag
agtcataacaagactgttacttcgatttgtgttggtaaaattgggaaggagagtggcgag
gaggcccagcagtatcggattttgagtgtgtctttggatggatatatgaaggtttttgat
tatgctaagttcaggattactcattcgatgaggtttcctaatcctttaatgtctgttggg
ttttccccggattgttctacgagggtgattggggcgtcgaatgggacaatgtatattggt
aggagaaaggtgaaggatagtgaaagtttggaacttgggggttttgggggtggatttgct
ccgctggaggagcctcagaggcgggtgttgaggccatcttatttcaggtattttcagcgg
gggcagaatgagaagccatccgaatgggattacttgattaagaaacctaagaagattaag
gtggcggaacatgataagttgttgaagaaatttatgcataaggaggctttggtagctgct
ttgagtgggaagaacccggaaaatgtggttgctgtgatggaggaattggttgctcggaag
aagttgttgcgatgtgtgtcaaacttggaaactgaggaacttggtttgcttctgaggttt
ctgcagaggtactccaccatgcttagattttcaaggtttttgatgggcttgacaaagaaa
gtaattgagatgcgaactgaagatattaagttttcagatgaactgagaggtcacattagg
aatcttaaacgagacgttgaggaggaaataagagtacaacagacattgcaacagatacag
ggaattgtatgtcctctgctcaagattgctgcaaggagatga
DBGET
integrated database retrieval system