KEGG   Nicotiana sylvestris (wood tobacco): 104214475
Entry
104214475         CDS       T05026                                 
Name
(RefSeq) protein SLOW WALKER 1-like
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    104214475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nsy03009]
    104214475
Ribosome biogenesis [BR:nsy03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    104214475
SSDB
Motif
Pfam: UTP15_C Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 WD40_CDC20-Fz WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_NOL10_N WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd DSE1_N Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C NBCH_WD40 WDR90_beta-prop_4th PAC11 ASA1 TRM82_WD Utp13 WD_LRWD1 Beta-prop_DCAF12 Beta-prop_VPS8 Herpes_gp350_A MIOS_WD40
Other DBs
NCBI-GeneID: 104214475
NCBI-ProteinID: XP_009762447
UniProt: A0A1U7V2I3
LinkDB
Position
4:169059295..169061435
AA seq 533 aa
MAENQSIARTFPVKPKLKPTSANSTTPTPESKYWRSFKTPKDLQSQTLVSAITSLSVSPI
SPHDFAATHSATVSIFSGQTLEPKTTISSAFKDTVTSASFRSDGCLIAAGDLSGAVQVLD
LKSRVPLRRLRGHTRPVRVVRYPRADKLHLLSGGDDAVVKYWDITTESKIYDLLGHKDYV
RCGDASPVSDDMFVSGSYDHTVKVWDVRVLNSGSVMEFDHGKPVEDVIYLPSGGLVATAG
ANSVKIWDVLGGGKLLYTMESHNKTVTSICVGKIGKESGEEAQQYRILSVSLDGYMKVFD
YAKFRITHSMRFPNPLMSVGFSPDCSTRVIGASNGTMYIGRRKVKDSESLELGGFGGGFA
PLEEPQRRVLRPSYFRYFQRGQNEKPSEWDYLIKKPKKIKVAEHDKLLKKFMHKEALVAA
LSGKNPENVVAVMEELVARKKLLRCVSNLETEELGLLLRFLQRYSTMLRFSRFLMGLTKK
VIEMRTEDIKFSDELRGHIRNLKRDVEEEIRVQQTLQQIQGIVCPLLKIAARR
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcagaaaatcaatccatagcaagaactttcccggtgaagcccaaattaaaacccact
tcagcaaattccactaccccaacccctgaatccaagtattggagatcattcaaaacccct
aaagatcttcaatcccaaaccctagtttctgcaatcacctccctatcagtttccccgata
tcccctcacgatttcgccgccacacattctgccactgtttccattttctccggccaaact
ctcgaacccaaaaccaccatatcctccgccttcaaagacacagtcacctccgcttcattc
cgttccgatggatgtctcatcgccgccggtgacctttcaggcgccgttcaggttcttgac
cttaaatcccgtgtccctctccgtcgtcttcgcggccatacccgacccgttcgtgttgtc
cgttacccacgcgccgataagctccacctgctctccggtggtgatgatgctgttgttaag
tactgggatattactactgagtccaaaatttacgatcttttggggcataaggattatgtg
aggtgtggcgatgcttcaccggttagtgatgatatgtttgtttcgggttcttatgatcat
acggtgaaagtttgggatgttagggttttgaattcgggttctgtgatggagtttgatcat
gggaagcctgttgaggatgtgatttacttgccatccggtgggttagttgctactgctggt
gcgaattctgtgaagatttgggatgttcttggaggtgggaagttgttatatacaatggag
agtcataacaagactgttacttcgatttgtgttggtaaaattgggaaggagagtggcgag
gaggcccagcagtatcggattttgagtgtgtctttggatggatatatgaaggtttttgat
tatgctaagttcaggattactcattcgatgaggtttcctaatcctttaatgtctgttggg
ttttccccggattgttctacgagggtgattggggcgtcgaatgggacaatgtatattggt
aggagaaaggtgaaggatagtgaaagtttggaacttgggggttttgggggtggatttgct
ccgctggaggagcctcagaggcgggtgttgaggccatcttatttcaggtattttcagcgg
gggcagaatgagaagccatccgaatgggattacttgattaagaaacctaagaagattaag
gtggcggaacatgataagttgttgaagaaatttatgcataaggaggctttggtagctgct
ttgagtgggaagaacccggaaaatgtggttgctgtgatggaggaattggttgctcggaag
aagttgttgcgatgtgtgtcaaacttggaaactgaggaacttggtttgcttctgaggttt
ctgcagaggtactccaccatgcttagattttcaaggtttttgatgggcttgacaaagaaa
gtaattgagatgcgaactgaagatattaagttttcagatgaactgagaggtcacattagg
aatcttaaacgagacgttgaggaggaaataagagtacaacagacattgcaacagatacag
ggaattgtatgtcctctgctcaagattgctgcaaggagatga

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