Nicotiana sylvestris (wood tobacco): 104214600
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Entry
104214600 CDS
T05026
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104214600
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
104214600
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
CCDC39
ABC_tran
AAA_16
Motif
Other DBs
NCBI-GeneID:
104214600
NCBI-ProteinID:
XP_009762596
UniProt:
A0A1U7VC77
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Position
9:complement(114502019..114544206)
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AA seq
1050 aa
AA seq
DB search
MSERRAKRPKITRGEDDYMPGNITEIELHNFMTFSKLTCKPGSRLNLVIGPNGSGKSSLV
CAIALGLGGEPQLLGRASSIGAFVKRGEESGYIKISLRGETKEEHLTITRKIDTRNKSEW
IFNGKAVPKKNITDITQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPRLP
VQHRDLISKSEELKKSERTVKSGRETLDQLREVNSQLERDVERLRQREHLLAQAETMKKK
LPWLKYDAKKPEFLEAKRQEQDAKMKLDEAAESLNELMEPIEEKKQEKAERDAKCKKMNG
LLGDNANKRMKLLDQDNRLDVQVRGKYNEMDDFKKQEKSRQRRISKAQEDLRTAELELAN
LPPYEPPRDKIDGLGSKILELQDAARELRSQKSEMERSLDRNRTAFRQCSDKLKEMENAN
NKRLRALQSSGVEKIFEAYNWVQEHQHQFNKSVYGPVLLEVNVSNRIHADYLEDHVPFYA
WKAFITQDATDRDFLVRNMRSFNLPVLNVADERQSRVPFKITEEMRMLGIHSRLDQVFDA
PDAVKEVLIDQFGLDSSYIGSRETDKRADEALQLGIFDLWTPENHYRWKKSRYGGHVSGT
VESVEHSRLLLCNVDAGEVERLKSQKLELEEAVSAFEDNLRAVKSELKNIEDQGAKLEKQ
REEIINESLLEKKRRREMEGRVRQRVINMKSLEREDDLDSIAAKLIDQIQAMKLKRFQLA
LELKNLLIDAVAHRRNYAEHNMASLELGLKIKEMEANVKHQEKFAMQASLHYEYCKKETE
ECRRQLEAAKRHAESVAIITPELEQAFCEMPSTIEELEAAIQDTISQANSILFLNHNVLE
EYETRQKKIESLSKTQEMEEEKLSNLIDEINALKERWLPTLRSLVSQINQTFSRNFQEMA
VAGEVSLDEHAMDFDKYGILIKVKFRETGQLQVLSAHHQSGGERSVSTILYLVSLQDLTN
CPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPNLEYSEACSILTVM
NGPWIEQPSKAWSGGECWRSVMGLMEERCR
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacgtcgcgctaaacgccccaaaatcaccaggggagaagatgattatatgcca
ggaaacataactgagattgagcttcataacttcatgacgttcagcaagttgacatgcaaa
cctggctcccgattaaatcttgtaattggaccaaatggctctggaaagagttctttagtc
tgtgcgatagcacttggtcttggtggtgagcctcagcttttggggagggcttctagtatt
ggagcatttgtaaaacgcggggaggagtcggggtacatcaagatttccttgagaggggaa
accaaggaggaacatttaactatcacgcggaaaatagatacacggaacaaatctgagtgg
atttttaatggaaaagctgtgccaaagaagaacataactgatataactcaaaggttcaat
atccaagttaacaatttgactcaatttctacctcaagacagggtttgtgaatttgcaaag
ttaactcctgttcaactccttgaagagactgaaaaagctgtgggtgatcctcggctacca
gtccagcatagagatcttattagcaagagtgaggagctgaagaagtctgaacgaactgtg
aagagcgggagagagacactggatcagttgagggaagtcaattctcaacttgaaagagat
gtcgagcgtctccgtcaaagagagcacctcctagcacaggctgaaaccatgaaaaagaaa
ttgccatggctgaagtacgatgctaagaagcctgagtttctggaagccaaaaggcaagaa
caagatgccaaaatgaagctggatgaagctgctgagagtttgaatgaactcatggaacct
atagaggaaaagaagcaagagaaagcagaacgagatgctaaatgcaaaaaaatgaatggc
ctgttgggtgacaatgccaacaagcgtatgaaacttctggatcaggacaatcgtttggat
gttcaagtgcgtggaaagtataatgaaatggatgacttcaagaagcaagagaaatctcgt
caacgtagaatttcgaaagcccaagaagatcttagaactgccgaattggagcttgcaaat
cttcctccttatgaacctcctagagataaaattgatggcttgggttctaaaattttggag
ctgcaagatgctgcaagagaactaaggtctcagaaatcagaaatggagagatcccttgat
cggaataggacagcattcaggcagtgctctgataaattgaaggagatggagaatgcaaac
aacaaaagattacgtgctttacagagtagtggtgttgaaaagatatttgaagcttacaat
tgggttcaggagcatcaacatcaatttaataaatctgtatatggtccagttcttcttgag
gtcaatgtttccaatcggattcatgcagattacctagaggatcacgtaccattctatgcc
tggaaggcctttataacacaagatgcaactgaccgtgacttcttagttagaaatatgcga
tcatttaatcttcctgttttaaatgtagcggatgaacgccagagccgtgttccctttaaa
attactgaggagatgcgtatgctaggcatccattcaaggcttgaccaagtctttgacgct
ccagatgcagtcaaggaagttctaatcgaccaatttgggctggattcttcttacataggc
tcacgtgaaactgataagagagctgatgaggcgttgcaattgggcatctttgatttatgg
acccctgaaaatcattacagatggaaaaaatccagatatggtggtcatgtttctggcact
gttgaatcagtggaacactctcgccttttgctatgcaatgtggatgcgggggaagttgag
aggctcaagtcccagaaacttgagttggaagaagccgtttctgcatttgaagataatctc
agggcagttaagagtgaattgaaaaacatagaggatcaaggtgccaaactcgaaaagcaa
cgggaagagattataaatgagtcactacttgagaagaaaagaaggcgtgagatggaaggc
cgtgtcagacagcgtgtgataaacatgaaatctttggaaagagaggatgacctggatagt
atagctgcaaagcttattgaccagattcaagctatgaagttaaagagatttcaacttgca
ttagaactcaagaatttacttattgatgctgtggctcaccgaagaaattatgctgaacat
aacatggcatcccttgaacttgggctgaagataaaagagatggaagctaatgtgaagcac
caagaaaaatttgctatgcaagcatctctgcattatgagtactgtaaaaaggagacagag
gaatgccgacggcaactggaagctgccaagaggcatgcagaatcagtagccattataact
ccagaactagagcaggctttttgtgagatgccatctacaattgaggaattggaagcggct
atccaagacaccatttctcaagccaattccattcttttcctgaaccataatgttctagaa
gagtatgaaacacgtcagaaaaaaatagaatctctttcaaagactcaagagatggaagaa
gagaaattaagcaacctcattgatgaaatcaatgctttaaaggaaaggtggctaccaaca
ttaagaagtcttgtttcacaaatcaaccagacttttagccgcaatttccaagaaatggct
gttgcaggagaagtttcattagatgagcatgccatggactttgacaaatatgggatacta
attaaagtcaaattcagggagaccggacaactccaagttctaagtgcccaccaccaatct
ggaggagaacggtctgtttcaaccattctttacctagtttctctgcaagacctaacaaat
tgcccatttagagtggtggatgaaataaatcaaggaatggatcctatcaatgagaggaaa
atgtttcagcaactagtgcgagctgccagccaacccaatacaccgcagtgctttttgctt
actccaaagttgctccctaatctggaatacagcgaagcatgcagcattttgactgtaatg
aatggtccttggattgagcagccatctaaagcttggagtggtggagagtgctggaggtct
gtgatgggactaatggaggaacgttgtcgctga
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