Nicotiana sylvestris (wood tobacco): 104214863
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Entry
104214863 CDS
T05026
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04120
Ubiquitin mediated proteolysis
nsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104214863
04120 Ubiquitin mediated proteolysis
104214863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nsy04121
]
104214863
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104214863
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104214863
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_16
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104214863
NCBI-ProteinID:
XP_009762888
UniProt:
A0A1U7V939
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Position
3:complement(154523758..154531282)
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AA seq
519 aa
AA seq
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MMRLQTYAGLSIIATLAVIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVLMCILWQL
TKKIFLGSLREAEVERLNEQSWRELMEILFAITIFRQDFSVMFLAMVTALLLIKGLHWLA
QKRVEYIETTPTVTTLSHVRIVSFLGFLLLIDSLFLYDSVSYLIQTRQASVSLFFAFEYM
ILATTTVSTFVKYVLYISDMLMEGQWEKKPVYTFYLELIRDLLHLSLYLCFFMVIFMNYG
VPLHLIRELYETFRNFKIRVADYIRYRKITSNMNDRFPDATPEELDVSDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPAENGTNVVGSRPDAQQGPGSSGAST
SQSSQANTVANNNVSQHQARLQAAAAAAAVYQKSFVYPSVPNLAWSPGYAPVPPSYSPTV
ASNEQSPQHQLANMPFAQYPQCGFLPFQYPGANNLSVPNAQLEAHKILLQQQIEVLQNQL
KLLENPNTQKSADALGISDSKGKTILSENSQGQTEGAEM
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggttacaaacttatgcggggcttagcataatagctacactggccgttatttat
catgcctttagtagcagaggccaattttacccagcaatggtttatttatcaacatccaag
atcagtctggtgcttcttcttaacatgggtcttgtcctcatgtgcattttgtggcagctg
actaagaaaatcttccttggttcccttcgagaggctgaggtggagaggctgaatgagcag
tcttggagggaactaatggaaatactttttgccatcacaattttccggcaagacttttcc
gttatgtttcttgcaatggtaactgcgctcttgcttatcaagggcttgcactggttggct
caaaagagggtcgagtatattgaaacaactccaactgttactacgttgtcccacgttcgc
atagtctccttcttgggctttctcctcctcatagacagtctcttcttgtacgactctgtc
agctatttgatacagacaagacaggcatctgtttctctattctttgcattcgagtatatg
atacttgcgacaacaactgtctcaacttttgtaaaatatgtcctctacataagcgacatg
cttatggaaggacaatgggagaagaagcctgtctatactttctacttagaacttatccga
gacttgctccacttgtctctgtacttgtgcttcttcatggtgattttcatgaactatggc
gttcccctgcatttgattcgggagctttatgagacattccgcaatttcaagattcgagtt
gccgattacatacgctatcggaagatcacttcaaatatgaatgaccgttttccagatgct
acaccagaagagctcgatgtaagtgatgctacctgcatcatatgtcgtgaggagatgacc
actgctaagaaacttatttgtgggcatctgtttcatgtgcattgcctccgttcatggcta
gagcgtcaacacacctgtcctacttgcagagcccttgttgtgccagctgaaaatgggacg
aatgtggtaggatcgcgaccagatgctcaacaaggccccggatcaagtggtgcaagcaca
tctcagagctcgcaagcaaatactgtggcaaataataatgttagccaacaccaggctaga
ctccaagctgctgctgcagcagcagcagtttatcagaagtcctttgtttacccttctgta
ccaaatctagcgtggtctcctggatatgctccagttcctccgtcctatagtccaacagtg
gcatcgaatgaacagtcaccgcaacatcagttagcaaatatgccctttgctcaatatcca
caatgtggtttcctcccttttcagtatcctggtgctaacaaccttagtgttccaaatgct
caacttgaagcccataagatacttttacagcaacaaattgaggttctgcaaaaccaactc
aagcttttagagaacccaaacactcagaaatcagcagatgctttaggaatttctgatagt
aagggaaaaacaattttgtcagagaactctcaaggacaaaccgaaggcgcagaaatgtga
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