KEGG   Nicotiana sylvestris (wood tobacco): 104214946
Entry
104214946         CDS       T05026                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020  RNA polymerase
nsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104214946
  09124 Replication and repair
   03420 Nucleotide excision repair
    104214946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104214946
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104214946
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     104214946
  RNA polymerase III system
   RNA polymerase III
     104214946
  RNA polymerase I system
   RNA polymerase I
     104214946
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104214946
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 104214946
NCBI-ProteinID: XP_070027659
LinkDB
Position
4:19059778..19063074
AA seq 142 aa
MADEDYDMDGGYEDEPIEPEPDEGAEVEEDNVNNEEVPDPLLGEXGKPEQEPVERPRKTS
KYMTKYELARILGTRALQISMNAPVMVELEGETDPLEIAMKELREKKIPFTIRRYLPDGS
YEDWGVDELIVEDTWKRQVGGA
NT seq 429 nt   +upstreamnt  +downstreamnt
atggctgacgaggattatgatatggacggaggatacgaggatgagcccatagagcccgag
cctgatgaaggagcagaggtcgaagaagataatgtcaacaatgaggaagtgccagacccc
cttttgggtgaatgaggaaaaccagagcaggagcctgtggaacgacctcggaaaacttcc
aagtatatgacaaaatatgaacttgcaagaatcctgggtactcgagcgctccagatcagc
atgaatgctcctgttatggttgagttggagggtgaaactgatccgcttgagattgcaatg
aaagagctccgagaaaagaagatacccttcacaattcgtcgatatctgcctgatggaagt
tatgaggattggggagttgatgaattgatcgttgaggatacatggaagagacaagtcgga
ggagcttga

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