Nicotiana sylvestris (wood tobacco): 104215054
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Entry
104215054 CDS
T05026
Name
(RefSeq) protein argonaute 4B-like isoform X2
KO
K11593
eukaryotic translation initiation factor 2C
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104215054
03036 Chromosome and associated proteins [BR:
nsy03036
]
104215054
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
104215054
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104215054
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
104215054
microRNA pathway
RISC loading complex
104215054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
104215054
NCBI-ProteinID:
XP_009763095
UniProt:
A0A1U7VMK1
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Position
3:complement(170503795..170509815)
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AA seq
893 aa
AA seq
DB search
MASKGTLSNLPPPPQEIPPNVVPIQVEPGKGCGSLSERLRPNFNQMNGPRPGVKGKKIHL
LTNHFRVCFQGGTSHLHSYSVNVHYENGDPVTRRNLIRKVIQKLWEIYSLELGEQAFATD
GQQSLFTACPLPKKKLEFTVVLDVATSKSKTDGSLSGNGDFSEGDQKRQKIISGFKTFKV
QITFVSVIPFQSMLDAPNGVKSGNNEVLRALDTILQHSNAKRNCLLLRQSYFSNEIRNFM
DLTGGILGLRGFHSSFQSVQGGLFFNLDVSTTTIIQLGPLVNFLMANQNVDNPFKIDWTK
ATGILKNLRIKLAHSNREHKITGLSDRLCKELKFLLRLKGSHDQNDNVQTVEVTVYDYFI
RRRGIELSYSSNLPCINVGSQHRPQFIPIELCSLVSLQRYKEELSIHQRSLLLKKLRQKP
MEIINDLNEELKTNNYDTDPMLRACGISINKSFTQVGGRILSPPLLRVGNKVDLVPKRSR
WNFNDKKFAEPKGIEFWVVVNFSTGFDIRSSYTELAKLGAMEGMHIRPPAFVFEENPKHK
KKPGSVRVDLMFEQIISKFRKDPPRFILCFLPTKFSCLYGPWKKKCLMDFGIRNQCIAMN
RVDEAYLANVILKMNARLGGINFMLSAEVSQTIPLVSKVPTLILGMDVRHAASARSDLPS
VAAVVGSRQWPMISCYAASIRVQPPKTETIHSLFKPLSEGEDTGIIRELLMDFYASSGKR
KPAQIIIFRQGLCESQFKQIINEVEEIIKACKFLDETWSPKFTLIIAQRRHHTKLFQPDS
SENIPPGTVVDTKICHPLYNNNFYMCANAARVGTSRPSHYFVLLDEIGFSSDDAQELVHC
LCYVSQRCTSAIYEVAPIRYARLAAAQMLEIVKSEGPQLPKLHKNIRDTMFFC
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctaaggggacgttgtcaaatttgccaccacctccccaagaaatccccccaaat
gtggttcccatacaagttgaaccagggaaaggttgcggatcacttagcgagagattaagg
ccaaattttaaccagatgaatggacctcgtccaggggtcaagggaaagaagatacatctg
ctgacaaatcattttagagtatgctttcaaggtggcacaagccacctacattcatacagt
gttaatgtccactacgaaaatggggaccctgtcacccgaaggaatttgattagaaaagtg
attcaaaaactctgggagatatacagcttagagttaggagagcaagcatttgctactgac
gggcaacagagccttttcaccgcctgtcctctaccaaagaagaagctagagttcacagtt
gtgcttgatgttgcaacatcgaaaagtaagacagatggcagccttagtggcaatggagac
ttcagcgagggtgatcaaaagaggcagaagatcatatccggattcaagactttcaaagta
cagataacctttgtttccgtcatcccctttcagtccatgcttgatgcaccaaatggagta
aaatcaggaaataatgaagttctgagagcattagacaccattttgcaacattctaatgca
aagagaaattgccttttgcttcgccaatcgtacttctccaacgagataaggaacttcatg
gacttgactggtggtatccttggattaagaggtttccactcgagtttccaatctgttcaa
ggtggattattttttaatcttgatgtatctactacaacaattatacaactaggtccactt
gttaactttctaatggccaaccaaaatgtggataatcccttcaaaatcgactggactaag
gcaacgggaatcttaaaaaatctcagaattaagctagcacactccaatagagaacacaaa
atcactggacttagtgacaggctttgcaaagagttgaagtttcttctgagactgaaggga
tcccatgatcaaaatgacaatgtccagactgttgaggtgacagtttatgattattttatt
aggagacgtggaatagagctcagttattcatcaaacttgccatgcatcaacgtggggagt
cagcatcgtccccagttcattcctattgagctctgctctttggtatccttacaacgatac
aaagaggaattatccatacaccaacgatccttgctactgaagaagttgcgccaaaaaccg
atggaaatcatcaacgatcttaatgaggaacttaaaaccaacaattatgacacagacccc
atgctacgagcttgtgggatctcaattaataaatcatttactcaagtaggaggacgtatt
ttatctccaccactgttgagggtgggaaacaaggtagatcttgttcctaaaaggtctcgc
tggaattttaatgacaagaagtttgcagagccaaaaggaattgaattctgggttgtggtt
aacttctctactggctttgacattcgttcttcatacaccgagctggcaaaattgggtgca
atggagggaatgcacattcgtcccccagcatttgtttttgaagagaatcctaagcataaa
aagaaaccgggctctgttcgagtggacctgatgtttgaacaaataatttcaaaatttcgc
aaggatcctcctcgattcattctctgctttcttcctacgaagttttcttgtttatatggt
ccgtggaagaaaaagtgccttatggactttggaatacgtaaccaatgcattgcaatgaac
agagttgacgaagcttatcttgctaatgttatcttaaaaatgaatgcaagacttggtggt
ataaattttatgctatcagctgaagtttcacagaccatacccttggtttctaaagttcct
acattgatcttaggcatggatgttagacatgctgcttctgcacggtcagatttaccctcc
gttgctgcagtggttggttctagacagtggccaatgatttcttgttatgcagcatctatt
cgtgtccaacctcctaagactgaaactatacattcactctttaaaccactttcagaaggg
gaggatacaggcataatcagggagctgctgatggatttttatgcaagctcagggaagagg
aagcccgctcagattattatattcaggcaaggtttatgtgaaagtcaattcaagcaaatt
attaacgaagtggaggaaattattaaggcctgtaagttcctggatgagacttggtctcct
aagttcactctaattattgcacaaagaagacaccacacaaagttgttccaacctgattcc
agtgaaaatattcctcctggcacagtcgtcgatactaaaatttgtcacccgctgtataac
aacaacttctacatgtgtgcaaatgcagcaagagttgggactagcaggcctagtcactac
tttgttttgctggatgagattggcttctcgtcggatgatgcacaagaactagtccattgt
ttatgctacgtgtctcagagatgcaccagtgctatatatgaagtggctccgattcgttat
gctcgtttggctgcggctcagatgttagaaattgtgaagtctgaggggcctcaactgccg
aagttgcacaaaaatatcagggacacaatgttcttctgctga
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