KEGG   Nicotiana sylvestris (wood tobacco): 104215248
Entry
104215248         CDS       T05026                                 
Name
(RefSeq) protein SPA1-RELATED 2 isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    104215248
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nsy04121]
    104215248
Ubiquitin system [BR:nsy04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    104215248
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd WDR55 Beta-prop_TEP1_C Beta-prop_RIG_2nd EIF3I Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Pkinase ANAPC4_WD40 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 WDR54 Beta-prop_IFT140_1st WD40_RFWD3 PK_Tyr_Ser-Thr WD40_like NHR2 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 104215248
NCBI-ProteinID: XP_009763310
UniProt: A0A1U7VN62
LinkDB
Position
8:complement(220638667..220651072)
AA seq 1041 aa
MEETVDEAIGDEVNGLDAFDGRQLRSKENDYTLRSGNSNMLQSHEVVTLSEGDHYQSTHN
LFTDILDGKNLDRIGSSEHASASPRCMNDAGVMVEELTLRNYNGKNLAIVDTLGNKEIMQ
VRPNQWFYQLAGGSACGSSHGEDGDTLFTGLVNQNQKKINENRNLDGENLQNNGDKAVSN
NLLPSSEGIRTKIFSKSGFSEYIVKSTLKGKGIICKKQLPHVSASESQGQMYPQCPNASS
TIVSPFQGIPKMGCSVNPNVYQDGISLRERLKAGGNKLNKAEGLYIFKQVLDLVDFAHSQ
GIILQDLRPSCFKLLRSNQVVYIGASVRTQSTENVIDRGVPQVEHSQKERSSSGKSISSS
IDPCVKKQKLSEDTHLNRRWSQYPFMSGHKSACTNTKLNAAQGYGDESNAEDCLKTELNS
NNFILPQLSIMSKPLLTSMSFNLEKKWYTSPEQFSEGGCTFSSNIYCLGVLLFELLSSFD
CERSHAAAMLDLRHRILPSCFLSEHPKEAGFCLWLLHPEPSARPTTREILQSEVIGGIKE
LRGDLSLSSIHEEESESQLLLYFLMSLQDQKQKDASKLVEELKCIEADVQEVQRRQSSNG
RCSSSHRESLVLWENRFIQKGVSSSDAYPKLPPVCESETRLIKNIRQLERAYFYTRSNIQ
PSDDVAMVRRTEEIFNNQENFVSTGNDNEKYRPTDQVGVFFDGLCKYARYSKFRVRGILR
NTDLNNSANVICSLSFDRDEEYLAAGGVSKKIKVFEYHALFNDSVDIHYPVIEMSNKSKL
SCICWNSYIRNYLATTDYDGAVKLWDASTGQAFSQLTEHNERAWSVDFSRVDPTKLASGS
DDHLVKLWSINEKNSVCTIRNKANVCCVQFSPDSSHFLAYSSADYKTYCYDLRNTSAPWC
VLAGHEKAVSYAKFLDAETLISASTDNSLKIWDLNKTNSSGYSADACVLTLKGHTNEKNF
VGMSVNEGYITCGSETNEVFSYYKSLPMPITSHKFGSIDPISGKETDDDNGQFVSSVCWR
RKSNTVLAANSSGCIKLLEMV
NT seq 3126 nt   +upstreamnt  +downstreamnt
atggaagaaactgttgatgaagctattggtgatgaggtgaatggactggatgcctttgat
ggtagacaacttcgaagtaaggagaatgactatactttgaggtccggaaactccaatatg
ctgcaatcacatgaagtggtcacacttagtgaaggtgatcattaccagagtactcacaat
ttgtttacagatatcctcgatggtaagaatctggacagaattggatcttctgaacatgca
agtgctagtcctcgttgtatgaatgatgctggggtcatggttgaagaattgacactgaga
aactacaatgggaaaaacttggctatagttgataccttgggcaataaagaaataatgcag
gttaggccaaaccagtggttttatcagctagcaggtggatctgcatgcggaagctcacat
ggggaagatggagacacattatttaccggacttgtgaatcagaatcagaaaaaaataaat
gaaaatcgtaatctagacggagaaaatttgcagaataatggtgataaagctgtttcgaac
aatttattaccctcttctgagggtatccggacgaagattttttccaagtcggggttttct
gaatatattgtgaaaagcacattaaaaggcaaaggaatcatatgcaaaaagcagttaccc
catgtatctgctagtgagtctcaaggccagatgtatccgcagtgtcctaatgcttcttcc
accatcgtttcaccttttcaaggtatccccaaaatgggctgcagtgttaatcccaatgtc
tatcaagatgggatcagtttaagagaacggctgaaagctgggggaaataaattgaacaaa
gctgaaggcttgtatattttcaaacaagttctggatttggtggattttgctcactcacaa
ggaattatcttgcaagacttgcgtccatcttgctttaaattgttgcgctcaaaccaagtt
gtatatattggagcatctgtacgcacgcagtccactgaaaatgtgattgatcgaggtgtt
cctcaggtggagcatagtcagaaagagagaagttcatctggaaaaagcatttcttcctcg
atcgatccttgtgtgaagaagcaaaaacttagtgaagacacgcaccttaataggaggtgg
tctcaatatcccttcatgtcaggccataaatctgcttgcacaaacactaagttaaatgct
gcacaaggctatggagatgagtcaaatgcagaggattgcctcaagacagaacttaactcg
aacaattttatattgcctcaactgtccattatgtcaaaaccattgctgacttccatgagc
tttaacttggagaagaagtggtataccagtcctgagcagttcagtgagggtggctgcaca
ttttcatcaaacatctactgcctgggggttcttctctttgagttgcttagctcatttgac
tgtgaaaggtctcatgcagctgcaatgcttgatcttcgccataggattcttccctcttgt
ttcttgtcagagcatcccaaagaagctggattttgtctttggctgcttcatccagaacct
tcagcacgtccaacaacaagggaaattttacagtctgaagttattggtggtattaaagaa
ttacgtggagatttatcactgtcgtctattcacgaagaggaatctgagtcacaactgttg
ttgtacttcctcatgtcactgcaagatcaaaagcagaaggatgcctcaaagctagtggaa
gaactcaaatgtatagaagcagatgtccaagaggttcagagacgccaaagcagcaacggc
cggtgttcttcctcacaccgggaatctcttgttttgtgggagaacaggtttattcagaaa
ggagtatcaagttcagatgcgtatccgaagcttccacctgtatgtgagagtgaaactaga
ttgatcaagaatatcaggcagcttgagagggcttacttctatacgcgatccaatattcag
ccttctgatgatgttgccatggtccgtagaactgaagaaatctttaataatcaggagaac
tttgtctcgacaggaaatgataatgagaagtatagacccacagatcaggttggggttttt
tttgatggcttatgcaagtatgctcggtatagcaagttcagagtaaggggaatattaaga
aatacagatctgaataattctgcaaatgtcatttgttctctaagctttgacagggatgag
gaatatttagctgctggtggggtgtcgaagaaaattaaagtatttgagtatcatgccctc
tttaatgattctgtcgacattcattacccagttatcgagatgtcaaacaaatctaagctc
agctgcatttgctggaacagttatatcaggaactatctggctaccactgactatgatggt
gcggttaagttatgggatgcgtctactggtcaagctttttcgcagttgactgagcataat
gaaagggcatggtctgtagacttttctcgtgtggatcccacaaagttagctagtggaagt
gacgatcatttggtgaaactttggagcatcaacgagaagaacagcgtgtgcacgatcaga
aacaaagcaaatgtttgctgtgttcagttttcacctgactccagtcattttctggcttat
agctctgccgattacaagacttattgctatgatcttcgaaatacctcagctccttggtgt
gtattggctggccatgagaaagctgttagttatgcaaaatttttggatgctgaaacgctc
atttctgcatccactgacaacagcctgaagatatgggatctcaataaaaccaactcaagt
ggctattcagccgatgcttgtgtcttaacccttaaagggcacaccaacgagaagaacttt
gtggggatgtctgtgaacgaaggatacataacttgcgggtcagaaacaaatgaggtcttc
tcttattacaaatctctgcctatgcctattacttctcacaagtttggctctattgatcca
atctctggtaaagagactgatgacgacaatgggcagtttgtttcaagtgtttgttggaga
cggaagtcaaacacggttcttgctgccaattccagtggctgcataaaactactagagatg
gtttag

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