Nicotiana sylvestris (wood tobacco): 104216114
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Entry
104216114 CDS
T05026
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104216114
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
104216114
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
104216114
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
104216114
NCBI-ProteinID:
XP_009764389
UniProt:
A0A1U7VPW3
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Position
9:172541546..172556610
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AA seq
591 aa
AA seq
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MKKGMKIVTYNVNGLRPRIQQYGSLPKLLDSLDADIICFQETKLSKHDLRADLVRAEGYE
SFFSCTRTSDRGRSAGYSGVATFCRVKSAFLSNEVALPIAAEEGFTGLLGTSNGYESRKD
ECPSIAEGLECFSKDELLKVDSEGRCLITDHGHFVLFNIYGPRAVQDDSERIQFKLTFFK
MLERRWECLLHQGRRIIIVGDLNIAPAAIDRCDAEPDFEKNEFRKWFRSLLLQNGGRLLD
VFRAKHPDRKGAYTCWSQSTGAEEFNFGSRIDHILSAGSCLHGEENQEGHDFGTCHVAEC
DILMQFQRWKPGNTPRWKGGRSIKLEGSDHVPVYTSLVEIPEVLEHSTPSLSTRYHPQVC
GSQQTLVSMFARRQSIEQVISEERISPLFPSHEKFTSTPENYDSKASQIRVLGSRSNANI
LPSIVAKKKSRHGQGSQLTLNSFFQKCTRSETSDSSSADLKICQTDISYSQIDLNGVPSA
DDESGPSKDCRLNAIDNIQNEGQLDACDSDKEKRKVALQEWQRIQQLMQNTVPLCKGHRE
PCVPRIVKKAGPNLGRRFYVCARAEGPASNPEANCGYFKWAAASKCKEKGK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaatgaagatagtgacatacaatgtgaacggcttaaggccacgcatacaa
caatacggttcacttccgaaacttctagattcactcgacgctgatatcatctgctttcag
gaaactaaattgtccaaacatgatttacgagccgatttggttcgtgctgagggttacgag
tctttcttctcttgcactcgtacttctgatcgtggccgctccgctggctattccggtgtt
gcaacattttgccgtgtaaaatctgcattcttgagcaatgaggtagctctgccaattgct
gcagaagagggcttcactggtctccttgggacatctaacggatatgaatctagaaaggat
gagtgtccttcaatagcagaaggccttgagtgcttttctaaagatgagcttcttaaagtt
gatagtgagggacgttgtctgattactgatcatggtcattttgttttattcaatatatat
gggcccagagctgttcaggatgactctgagagaatccaatttaagctgacgtttttcaag
atgttagagagaagatgggagtgtctcctgcatcaaggaaggaggattatcatcgtaggg
gatctcaatattgctcctgctgccatagatcgctgtgacgcagaacctgattttgagaag
aacgagttcaggaaatggtttagatcgttattattgcagaatggagggcgtctccttgat
gtttttagagcaaaacatcctgatagaaaaggagcctatacttgctggtcacagagtaca
ggagccgaggaatttaattttggttctaggattgaccatatacttagtgcaggatcatgc
ttgcatggtgaggaaaatcaagaagggcatgactttggtacttgccatgttgcagagtgt
gacatattgatgcaatttcaaaggtggaaacctggaaatacgccaaggtggaaaggaggg
aggagcatcaaattagaaggttctgatcatgttccagtttacacgagtttagtagaaatc
cctgaagtattggagcatagcaccccatcattgtctaccagataccatccccaggtctgc
gggagtcagcaaactcttgtgtctatgttcgcaagaaggcaatcaattgagcaagttatt
tcagaggaaaggataagccctctgttcccaagtcatgaaaagtttacctcaactccagag
aactacgatagtaaagcttcgcaaattagggtgcttggttctcgaagtaacgctaatatt
ctgccgagcattgtagccaagaagaaatcaaggcatggtcaggggtctcagctcacactc
aactcgttcttccagaaatgcactagaagtgagacttctgacagtagctctgctgatctt
aaaatttgtcagacagacatttcttactctcagattgacctcaatggagttccttctgct
gatgatgaaagtggtccttcaaaggactgcagattaaatgctattgacaatattcaaaat
gaaggccagttagatgcatgcgattcagataaagagaagaggaaagtggcattacaggag
tggcaaaggattcagcaattaatgcagaatactgtacctctttgtaagggccatcgagaa
ccttgtgttccacggattgttaaaaaagcaggccccaatttgggccgcagattttatgtc
tgtgctcgagctgagggacctgcatcaaatcctgaagcaaattgtggttatttcaaatgg
gctgctgcttcaaaatgtaaggagaaaggaaagtga
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