Nicotiana sylvestris (wood tobacco): 104216226
Help
Entry
104216226 CDS
T05026
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104216226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104216226
03036 Chromosome and associated proteins [BR:
nsy03036
]
104216226
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104216226
Coactivators
SAGA/TFTC/STAGA complex
104216226
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
104216226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
104216226
NCBI-ProteinID:
XP_009764535
UniProt:
A0A1U7VRL8
LinkDB
All DBs
Position
11:complement(57862475..57889482)
Genome browser
AA seq
916 aa
AA seq
DB search
MDPSMMKLLEEDEDESMHSEADLEAFTAALNKNIKGDSSTSQPSDSGRGSCCTLNQSAPW
QTSGDDENADHQSLQNSQNMQQKEGDSSDMELKQHGIDAPTQQHEDDSSQELNSLHLQHI
HAKDAYQLLRAEQNTLHASEVLNLKRSEKNPENLDSRHLNLQGLSNQQSMQSFPTGTSGQ
QLMAAKTSNQPKSATGLSSQPAIDVVKQGKQVPFAILIPHIQRQLDKDRAMHLQTLYLKL
RKNEITKEGFIRHMRSIIGEQMLKMAVYKFQSQAARNDQAVPQSQASPQQHQQNRTDDSS
NLAGDSNAKKLHEVENQADLHGTPGSQISSSSLFAVKQERDCSAFPVKGLNKQQQQHLHF
SQASFPKFANIGDTYSPYSVTNVSSSVGTPVKQPSNDIQIRQIPAYPNRNATPLRASTHA
VNMIKAPKLERQNSFGEPKRIPGGSLSHVSNTSTMQQSSLQCSRSTNKEQKILLSTPMTN
LKPEPIDHLHDQGRESQLASFASVQVEQGNSSSVSSKVEAFKMQTSRMGISTTTSIKPSN
LLSPSVSSQMDPNTLLNSRTPSVISPIGPANNGKIPLKMPTIGQKKPLVTQGFSPPPSGK
KQKVSGAFPDQSIEQLNDVTAVSGVNLKEEEEQLFSGPKEDSRVSEASHQAVREEEERLI
LQKIPLQKKLTGIMAKCGLKNMSSDVERCLSLCVEERMRGLMSSLIRLSKQRVNIEKSRH
RTIVTSDVGQQIMLMNRKVREEWEKKQAEAEKLQVANEPEGDIGDDGDKEKDAGRIRSMK
RNKEEDDKLRTTAANVAARAAVGGDDMMSKWQLMAEQARQKREGALDMVSPSQPGKDVKW
RSLSTPTRNLRDNQEAKNRSQSTAPITLGAVRRVGKSQVAVHARVPRNITVKDVIAVLER
EPQMFKSTLIYRFHEK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggacccttccatgatgaagctccttgaggaagatgaggatgagtcaatgcattcggag
gcagatttggaggcgttcactgctgccttaaataagaatattaaaggagacagttcaaca
tctcagccatcagattctggtagaggaagttgttgcaccttaaatcagtctgctccatgg
caaacttctggcgatgatgaaaatgccgatcatcagagtcttcaaaattcgcagaacatg
cagcaaaaggagggagattcatctgatatggaactaaagcaacatggtatagatgctcct
actcaacaacacgaagatgattcctcacaggagctcaattcccttcatttgcagcatata
catgccaaagatgcttatcaactactgagggctgaacaaaacacacttcacgcctctgag
gtgttgaatttgaagagatctgaaaagaatcctgaaaatttagattcccggcatctaaac
ttgcagggattgagtaatcaacaatctatgcagtcatttccaacagggactagcggtcag
caattgatggcagcaaagacaagtaatcaaccaaaatctgcaactggtttgagtagccaa
ccagcaatcgatgtagttaaacagggcaaacaagtgccttttgccatccttatccctcac
atacaacgccaactcgacaaagacagggcgatgcatcttcagactctctaccttaaactc
aggaaaaatgaaatcactaaggaaggttttatacgacacatgagaagtataataggtgag
cagatgctcaaaatggctgtatacaaattccaatctcaggcagctagaaatgatcaggct
gtacctcagtctcaggcttcaccacagcaacaccagcaaaatcgaactgatgattcaagc
aacttggcaggtgatagtaatgctaaaaaattgcatgaggtggaaaaccaagcagatttg
catggaacaccaggaagccaaatttcttcttctagtttgtttgctgtaaaacaagaaaga
gattgttcagcattcccagtaaagggtcttaataagcaacaacagcagcatttgcacttt
tcacaggcatcttttcccaagtttgcaaatattggggacacctatagtccatattctgta
actaatgttagttcatctgtggggacaccagtcaaacagccatctaatgatatacagata
aggcaaattccggcttatccaaatagaaatgcaactccattaagagcctcaacacatgcc
gtgaatatgataaaggcacctaagcttgaaagacaaaattcatttggtgaacccaaaaga
ataccaggtggaagtctttctcatgtgtcaaatacatcaacaatgcaacagagttcactt
caatgctcacggtccaccaataaagagcagaaaattcttctttcgacaccaatgaccaat
ctaaagcctgaaccaattgatcatttgcatgaccaggggcgtgaatcacagttggcatcc
ttcgcatcagttcaagtagaacaaggaaattccagctcagtgagttcaaaggttgaagct
tttaaaatgcagacttctagaatgggtatctcaacaaccactagcatcaaaccttcaaat
ttactctccccttcagtgtcatctcaaatggaccctaatacattgttgaattctagaaca
ccttctgtgatatctcccattgggcccgcaaacaatggaaagatacccttgaaaatgcct
actatcgggcagaagaagcctctcgttacgcaaggtttctctcctccaccttcaggaaag
aagcaaaaggtgtctggagcctttccagatcagagcattgaacaacttaatgatgttacg
gctgttagtggagttaatctaaaggaggaggaagaacaactattttctgggcccaaggaa
gacagtcgagtttctgaagcatctcatcaagctgtgcgagaagaagaggaaaggctgatt
ctgcagaaaattccgcttcaaaagaaattgactggaataatggcaaaatgtggtttaaag
aatatgagcagtgatgtcgaaagatgcttatcattgtgtgtggaggaaaggatgcgtgga
cttatgagcagtctcatcagactatcgaaacagagggtcaatattgagaagtcaagacat
agaacaattgtcacctcagatgttggtcaacaaataatgttaatgaaccggaaagttcgg
gaagaatgggaaaagaagcaggcagaagcagaaaaattacaagtggcaaatgaaccggag
ggtgatattggagatgatggtgataaggagaaggatgcaggtcgcataaggtcaatgaag
agaaacaaggaagaggatgacaagttgcggacaacagctgcaaatgttgctgctcgagct
gcagttggaggagatgatatgatgtcgaagtggcaattaatggctgaacaggccaggcag
aagcgagaaggggcactcgacatggtgtctccttcacagcctggtaaagatgtgaagtgg
aggtccttatcaactcccacaagaaatctgagagacaatcaagaagctaagaacagaagc
cagtcaactgcccctattacacttggtgctgttagaagagttggcaaaagtcaagttgca
gtacacgccagggttcctcgtaatattactgtcaaggatgtgatagccgtccttgaaaga
gaacctcaaatgtttaagtctacattgatataccgcttccatgaaaaatga
DBGET
integrated database retrieval system
