KEGG   Nicotiana sylvestris (wood tobacco): 104216268
Entry
104216268         CDS       T05026                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104216268
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104216268
   03041 Spliceosome [BR:nsy03041]
    104216268
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104216268
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104216268
Spliceosome [BR:nsy03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104216268
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2 RRM_Nup35 Spo7_2_N
Other DBs
NCBI-GeneID: 104216268
NCBI-ProteinID: XP_009764592
UniProt: A0A1U7V969
LinkDB
Position
7:15392557..15395277
AA seq 339 aa
MGSRKTDFGDGASPGKIFIGGLAKETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGF
ITYEDPSVVDTVIAENHIINDKQVEIKRTIPKGSAESKDFKTKKIFVGGIPTTMTEDEFK
NFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRIDMMGTQVEIKKAE
PKKPSNPASAPAYGSDSRGRGYGDSYGGFGNSYSGFGSGGFGPASYRSFGARFGEYGYGG
GEFGGRYGDFGGSDFGGYRGDPSLGYSSRFGSYAGGFGGGYGGSGLGSYGRGGGYGGYGG
VGPDASYESGPGAGYGGPGGLYGSRAGYSGSGRYHPYSR
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgggttccagaaagaccgatttcggcgacggcgctagtcctggaaaaatctttattgga
ggtctagcgaaagagacaacgttagaacaatttgtgaagtactttgagaagtatggggag
ataatagactcggtgattatgaaggataggcatactggtagacccagaggttttgggttc
atcacttatgaagatccatccgttgtagacactgttatagccgaaaaccatattatcaat
gacaaacaagttgagattaaaagaaccattccgaaaggatctgctgagtcaaaggatttt
aaaacaaagaagatcttcgttggtggcattccaactaccatgactgaagatgaattcaag
aactttttctccaagtttgggaaagtaacagagtacgagatcatacgagatcacgtgtcc
aagcgttctagaggttttggatttattgtttttgacaatgaacaagtagttgataatttg
ctggctgagggaaataggattgacatgatgggtactcaggttgagatcaagaaggcagaa
ccaaagaaaccctcaaacccagcatctgctcctgcatatggtagtgactctagggggcgt
ggatatggtgatagttatggaggatttggcaattcatatagcggttttggcagtggcggt
tttggccctgcttcttataggtcgtttggagctaggtttggtgaatatggatatggtggt
ggtgaatttggtggtagatatggagactttggcggtagtgattttggtggttaccgtggg
gacccgtcacttggttattctagtcgttttggctcttacgctggtgggtttggtggggga
tacggtggcagtggactgggttcatatggccgtggaggtggttatggaggttatggtgga
gttgggcctgatgctagttatgaatctggccctggtgctggttacggtggaccaggaggt
ttatatggaagtagggcaggctatagtggcagtggccgttaccatccttactccaggtag

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