Nicotiana sylvestris (wood tobacco): 104216325
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Entry
104216325 CDS
T05026
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104216325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104216325
Membrane trafficking [BR:
nsy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
104216325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
104216325
NCBI-ProteinID:
XP_009764647
UniProt:
A0A1U7V9C6
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Position
10:complement(76241121..76255511)
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AA seq
791 aa
AA seq
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MIATEGIEDEEKWLAEGIAAIQHNAFYMSRALDTNNLREALKYSALLLSELRTSKLSPHK
YYELYMRAFDELRKLEMFFREEDRHGCSVINLYELVQHAGNILPRLYLLCTVGSVYIKSK
EAPAKDILKDLVEMCRGVQHPTRGLFLRSYLAQISRDKLPDLGSEYEGEGDTVMDAVDFV
LQNFTEMNKLWVRMQHHGPVRLKEKLEKERSELRDLVGKNLHVLSQIEGVDLEMYKDVVL
PRVLEQVVNCKDEIAQYYLMDCIIQVFPDEYHLQTLETLLGACPQLQPAVDVKTVLSRLM
ERLSNYADSSPEVLPDFLQVEAFAKLSSAIGKVIDAQIDMPVVGAISLYVSLLTFTLRVH
PDRLDYVDQVLGACVKKLSGKAKLEDSKATKQVVALLSAPLEKYTDIVTVLTLSNYPRVM
DHLDAETNKIMAKIIIESIMKNDTCVSTADKVEVLFELIKGLIKDLDETATDELDEEDFK
EEQNSVARLIHMLYNDEPEEMLKIICTVRKHIMAGGPKRITFTVPPLVFSALKLVRRLQG
QDGDMAGEEVPATPKKIFQLMNETIEALSSVPSSELALRLYLQCAEAANDCDLEPIAYEF
FTQAFVLYEEEVADSKAQVTAIHLIIGTLQKMTVFGVENRDTLTHKATGYSAKLLKKPDQ
CRAVYACSHLFWVDDQDGIKDGERVLLCLKRSLRIANAAQQQANVTRGSSGPVTLFVEIL
NKYLYFFEKGNPQITPGAIQSLIELIKTEMQSDTTTPDSASDAFFTSTLRYVQFQRQKGG
LMGEKYNPIKV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaaccgaaggaatcgaagacgaagagaaatggctagcggaaggcatcgccgct
attcaacacaacgcattttacatgtctcgtgctttggatacgaataatcttcgagaagca
ttgaagtattctgcattattattatctgagctccggacttcgaaactttcgccgcacaaa
tactatgagctctatatgcgagcttttgatgaattgaggaagctggagatgttcttcaga
gaagaagatagacatggttgttcagttattaacttatatgaactcgttcaacatgctgga
aatatattgcctcggttgtatctcctatgtacagtaggatctgtatacatcaaatcaaaa
gaggctcctgctaaagatattctcaaggatcttgttgaaatgtgtcgtggtgttcagcat
ccgacacgtggtctcttcttgaggagttatcttgctcaaattagcagagacaaattgcca
gacttaggttctgagtatgaaggagaaggcgataccgtcatggatgctgtagattttgtg
ctgcagaacttcacagagatgaataaactttgggttagaatgcagcatcatggacctgtc
aggttgaaagagaaactggaaaaagaaaggagcgaacttcgtgatcttgtcgggaagaat
ttgcacgttcttagtcagatagagggtgttgatcttgaaatgtacaaggatgtggttctg
cccagagttttggagcaggttgtcaattgtaaggatgagattgcccagtattatctgatg
gactgcataattcaggtctttccagatgagtaccacttgcagacacttgaaaccttattg
ggtgcttgtccgcaactccaacctgctgttgacgttaagactgtgctgtcacgattgatg
gagagattgtcaaactatgctgattcaagtcccgaagtgttacctgacttccttcaagtt
gaagcatttgccaagctaagcagtgccatcgggaaggtcattgatgcacaaattgatatg
ccagttgttggagccatttctttgtatgtatctctactgaccttcactctccgtgttcat
cctgatcgactagactacgtggatcaagtactgggagcatgtgtcaagaaactttctggt
aaagcaaagcttgaggatagtaaagcgacaaaacaagttgttgctctcctgagtgcaccg
ttggagaaatacactgacattgtgacagttctaactctttcaaattatccacgtgtcatg
gatcaccttgatgctgaaacaaataagatcatggcgaagataatcattgagagcatcatg
aagaatgacacctgtgtatcaactgctgacaaggttgaggttttgtttgaattgataaaa
gggctcatcaaggacttggatgaaactgctaccgatgagctcgatgaggaggatttcaag
gaggaacagaattctgttgctcgtcttatacacatgctatataatgatgaacctgaggaa
atgttaaagataatatgcactgttaggaagcatataatggctggaggtccaaagcgcata
actttcacagttcctcctctagtcttttctgcactgaagttggttaggagactgcaaggt
caggatggagatatggctggagaagaggttccagctacaccaaagaaaatttttcagtta
atgaatgagactatcgaggctctttcatcagttccatcgtcagaactggcattgaggttg
tacttgcagtgtgcagaggctgccaatgattgtgatcttgaaccaattgcgtatgaattt
tttacacaagcttttgtactatatgaagaagaagttgcggattcaaaagcgcaagtgact
gcaatacacttgataattggaactcttcagaagatgactgtgtttggtgttgagaacagg
gataccttaactcataaggccacagggtattcagcaaaacttctaaagaaacctgatcaa
tgtagagcagtttatgcttgttcacatctcttttgggttgacgatcaagatggtattaaa
gatggagaaagggtcttgctttgcctaaagcgttcgttgcggattgctaatgcagcacag
caacaggcaaatgttacaaggggtagcagtggacctgtcacactttttgttgaaatactt
aacaagtacctctatttttttgagaaggggaaccctcaaataacacctggtgcaattcag
agccttatagagttgattaaaactgagatgcagagtgacaccacgaccccagattctgct
tcggacgctttcttcaccagcacattgcgctatgttcaatttcagagacaaaaaggaggg
ctaatgggagagaaatacaatccaattaaggtgtga
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