Nicotiana sylvestris (wood tobacco): 104216516
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Entry
104216516 CDS
T05026
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104216516
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104216516
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
Pre-60S particles
Helicases
104216516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
104216516
NCBI-ProteinID:
XP_009764877
UniProt:
A0A1U7VA14
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MASNPNKALTNTRFSDLEPPLSEPVLEALTNSGFEFCTPVQAATIPLLCNYKDVTVDAAT
GSGKTLAFVVPLVEILRRSSSNPKPHQVMGIIISPARELSSQIFHVAQPFISTLANVRPM
LLVGGQGVKADVRKIEEEGANLLIGTPGRLYDIMERMDILDFRDFEILILDEADRLLEMG
FEKQINSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKQLNGSASSGN
SASSKTPSGLHIEYLECEADKKSSQLVHLLTKNRSKKIMIYFMTCACVDYWGTVFPRLSC
LKSFSLISLHGKMKQSAREKAIASFTSLSSGILLCTDVAARGLDIPGVDYIIQYDPPQDH
KMFIHRVGRTARLGRQGSAVVFLLPKEEAYVEFLCIQGVFLEEGECASEAPDIIDEIRSA
AKKDRDVMEKGLRAFVSYIRAYKEHHCSYILRWKELEIGKLGTGYGLLQLPSVPEVKHHS
LSTKGFTAVEDINLEEIKFKDKSREKQRKKNLQVRKAARAQQEEQKIQRLKKEANSTATA
MRKKTAKQRRATQLVEDEDEITREYRLLKKLKKGAIDENEFAKLTGTEDLLSDI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatccgaacaaagccttaacgaatacgcgtttctccgacctcgaaccaccg
ctctccgagccagttttggaagccttaaccaattccggcttcgagttctgtactcctgtt
caggctgccaccatacccttactctgcaactacaaggatgtcaccgtcgacgccgccact
ggctctggtaaaaccctagccttcgtcgttcctctcgttgagatcctccgtcgctcctcc
tctaatcccaaacctcaccaggtaatgggtataattatatcacctgccagggagttgtcg
tcacaaatatttcacgttgctcaaccgttcatttccacattagcaaacgttaggcctatg
cttctcgttgggggacaaggcgtaaaggcagatgtcagaaagatagaggaggaaggagca
aatttgttgatcgggacacctgggaggctatatgacattatggagcgcatggatatactg
gactttcgggattttgagattctgatattagatgaggctgataggctattagagatggga
tttgaaaagcagataaattcaattatttctcgtttacctaagcttcgacgaacgggtctc
ttctctgctacgcaaactgaggcagttgaagaactatcaaaggcaggattaagaaatcct
gtcagggttgaagttcgggcagaagcaaaacagttgaatggttctgcatcgtctgggaat
tcggcctcatcaaaaacaccttccggccttcatattgagtatcttgaatgcgaagcggac
aagaaatcttcgcagcttgtacacctcctgacgaagaacaggtcaaaaaaaattatgatc
tatttcatgacttgtgcttgtgttgattactggggaactgtttttccgcgtctctcttgt
ctgaaaagtttttcgttaatctctcttcatggaaagatgaagcagagtgcaagggagaaa
gcaatagcatcatttacatctctttccagtggcattcttttatgcacagatgtagcagca
cgtggacttgatattccaggtgttgattatataatacagtacgaccctcctcaggatcat
aaaatgtttatacatagagtaggccgaacagctaggctgggccgacaaggaagtgctgtt
gtttttctattaccaaaggaggaagcatatgtggaattcttgtgtatacaaggcgttttc
ttagaagagggggaatgtgcctctgaggctcccgatattatcgatgaaatacggtcagca
gcaaagaaagatcgtgatgtaatggagaaaggacttagggcgtttgtttcatacatccgt
gcatataaagagcatcactgctcttacattttgaggtggaaggagcttgagattgggaag
ttgggcacaggatatggtcttttgcagcttccttctgtgcctgaagtgaagcatcattct
ctttctacgaagggatttacggcagttgaagatatcaacctggaggagatcaagtttaag
gacaagtcaagggagaagcaaagaaagaaaaatttgcaagtgagaaaagctgcaagggca
caacaagaagaacagaagatacagagacttaaaaaggaggcaaattctacagcaactgcc
atgagaaagaaaactgccaaacagagacgtgctacgcagttagttgaagatgaagatgag
attacaagggagtaccgcttattgaaaaagctaaaaaagggagcgatcgatgagaatgag
tttgcaaaattgactgggactgaggacttactttctgacatatga
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