Nicotiana sylvestris (wood tobacco): 104216744
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Entry
104216744 CDS
T05026
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
104216744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104216744
03029 Mitochondrial biogenesis [BR:
nsy03029
]
104216744
Membrane trafficking [BR:
nsy04131
]
Autophagy
Autophagosome formation proteins
ULK complex
104216744
Atg1 complex
104216744
Mitochondrial biogenesis [BR:
nsy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
104216744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
104216744
NCBI-ProteinID:
XP_009765165
UniProt:
A0A1U7VTB4
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Position
6:complement(75695196..75702024)
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AA seq
606 aa
AA seq
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MDFQSNPQGGEHGRFEQILAQFLLKSLHIILDSRVPSIRPYGGSGEVKKSDRWFNLVLGD
RPAVLDNLNQLHRNLVEPMIIDIILVQDKSSTSLEHDSSTGFAGGYTETVVERWVVQCEN
RRSMVPHMGDSSFKKTYKKCIILLRSLYSMMRLLPAFKAFRKLSLSSHSCYFDINYKVSS
FSEPFSRAAEALMKQYTFIPVDSQQGRLSLSVTYRENLADFNLEISASFPPEIITDYVGS
PLTDPMRSFPSTSMDKGGSLRRTQSSSSAPVQRPQSWTSGLLRAPSLPQPYVGSPPLYRA
PYELSTSPSDVYGQRVPPNYRLPTLHKATNYDDDQLSPPFSPSPSPSPSPPTYFSGANPV
QTRLRSETGPVSIPHPLMDRSSKHISPNLSDPNRHSLPPMSPRSTKHDSSSHESPSGIRS
SRKVDLLRAPESDTGTTNPGQKVSTDARDDSGRFSGLLSSSGSPRVGFSRSSSRLSVQDD
LDDCDFSCPFIVDDVDNADSRARETLDSKKGSDTSSQASARTRKSQDAAVGALVHMLRTA
PPLRQDSSCYTSRSVKTEVEGETGTASGFYVPRKASDALEELKTYTQLKDMLLSKSTTRS
GSEGGT
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagagtaacccacaggggggtgaacatggaagatttgagcaaatacttgct
caatttcttcttaagagcttgcatattattttggactcaagggttccttcgatacgacct
tatggtggtagtggggaagtgaagaagagtgacaggtggttcaatttggtgttgggagat
cgtcctgctgttcttgataacttgaatcagttgcaccggaatttggtggaacccatgata
atagatataatacttgttcaggataaatctagtacttcattggagcacgattcgagtaca
ggatttgcaggaggatatacagaaactgttgtggagaggtgggttgtacaatgtgagaat
cggaggtcaatggttccgcacatgggtgattcctctttcaaaaaaacatacaagaaatgc
attatactactccgctcgctttattcaatgatgaggctcctgcctgcattcaaggccttc
aggaaactatcattgtcaagtcatagttgttattttgatatcaattataaagtgtcttca
tttagtgagccattctcaagggcagcggaggcgttgatgaagcaatatacttttattcca
gttgattcccagcaaggcagactttctttatctgtgacatatcgggaaaatttggcggac
ttcaatctggagatttctgcatcctttccgcctgagatcattacagattatgttggcagt
ccactcactgaccctatgaggtcattcccttctacctcaatggataagggtggttcattg
agaaggacacagtcatcttcttcagcaccagttcagcgtccacaaagttggactagtggt
ctcctcagggcaccttctttacctcagccatatgtaggatctccacctttgtaccgtgca
ccatatgagctttcaacttcgcccagtgatgtgtatggacagagggttccacctaactac
agattgcccactctccacaaagcaactaattatgatgacgaccagctttcccctccattt
tcaccatctccatctccatctccttctccacccacatatttctcaggtgcaaatcctgtg
cagactcgtttgcgttcagaaactggtcctgtcagtatccctcatccattgatggacaga
agttccaaacacatatctcctaatttgtctgatccaaacaggcattctctcccacctatg
tcgcctagaagcacaaagcacgattcttcatcccatgaatccccttctggaatcaggtca
tcgagaaaagtggatttgctaagggctccagagtcagataccgggactactaatcctgga
caaaaggtgtctacagatgctagagacgattcaggacggttttcaggtttactatcttca
agtggttcaccacgtgttgggttttctagaagttctagcagattatctgttcaggatgac
ttggatgactgtgatttttcttgtccttttatagttgatgatgttgataatgcggattct
agagccagagagacccttgattcaaaaaaaggttcagacacatcttctcaagcatctgca
agaaccagaaaatctcaagacgctgctgtaggtgcccttgttcacatgctgaggactgct
ccccctttgcgtcaagattctagctgttatacctcgcgttctgtaaagacagaagtagag
ggagaaactggcactgcatcagggttctatgttcctagaaaggcatctgacgcattggag
gagctcaaaacttacacacaattgaaagatatgttactttccaagagcacaacccgctcg
ggcagtgagggtggaacatag
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