Nicotiana sylvestris (wood tobacco): 104216952
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Entry
104216952 CDS
T05026
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nsy03041
]
104216952
Spliceosome [BR:
nsy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104216952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_ACIN1
RRM_PARP14_3
DUF3587
Motif
Other DBs
NCBI-GeneID:
104216952
NCBI-ProteinID:
XP_009765394
UniProt:
A0A1U7VSN7
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All DBs
Position
12:complement(103652703..103661240)
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AA seq
443 aa
AA seq
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MTEPSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQGVPSAVNALQF
YSNVQPSIRGRNVYVQFSSHQELTTMDQNSQGRGDEPNRILLVTIHHVLYPITVEVLHQV
FSPHGIVEKIVTFQKSAGFQALIQYQLPQNAVSARNSLQGRNIYDGCCQLDVQFSNLDEL
QVNYNNERSRDFTNPNLPSEQKGKSPQGYGDAGGMYSLQGSGPRGVGFPQMGNAAAIAAA
FPGGLPPGISGTNDRCTVIVSNLNPDRIDEDKLFNLFSIYGNIIRIKLLRNKPDHALVQM
GDGFQAELVVHFLKGALLFGTRLEVNYSKHPNIITGPDTHDYSNSNLNRFNRNAAKNYRY
CCSPTKMIHLSSLPQDVTEEEIVAHMEEHGTIVGTKLFEMNGKKQALVLFENEEQATEAL
VCKHATSLGGSIIRISFSQLQNI
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgagccttcaaaggtcattcacgttcgcaacgtgggccacgagatctctgagaat
gacttgcttcagctatttcaacccttcggcgtcattaccaaacttgtaatgcttagggca
aaaaatcaggctctcttgcaaatgcaaggcgttccatctgctgtaaatgcattacagttc
tattcaaatgttcaacccagcatcagggggagaaatgtttatgtacaattctcatctcat
caagaactgacaaccatggatcagaactcccaagggcgaggagacgagcctaatcgaatt
ctcttagttacgatacatcacgtgctatatcctataactgtggaagtgctgcatcaagtg
ttttcacctcatggaattgttgaaaagatcgtgacatttcagaagtcggctggttttcaa
gctttgattcagtaccaattaccccagaatgctgtttctgctaggaactctctccagggg
cgtaatatatatgatggttgttgtcagcttgatgtacaattctcaaacctagatgaattg
caagtgaactacaataatgaacgctcgagggacttcaccaacccaaatctaccatcagaa
cagaagggcaaatctcctcaaggatatggagatgcaggaggcatgtactccttgcaaggt
tccgggcctcgtggagttggatttcctcagatgggaaatgctgcagcaattgcagctgcc
tttcctggtggtttgcctcctggcataagcgggacaaatgacaggtgtactgttattgta
tctaatttaaatccagatagaatagacgaggacaagctttttaatctgttctccatttat
ggaaacatcatcagaattaagctcctacggaataaaccagatcatgctctggttcagatg
ggtgatggtttccaggcagagctagttgtgcactttttgaagggtgccctgttatttggt
acgcggttggaagtcaactattcaaagcacccaaatattatcactggaccagatacacat
gactactcaaactcaaatctcaatcgttttaaccggaatgctgccaaaaactaccggtac
tgttgctcccctaccaaaatgatccacctgtcaagcctgccccaggacgtgacggaggaa
gagatcgtggcccacatggaggagcatggtaccattgtcggtacaaagctttttgaaatg
aatgggaagaagcaggctcttgttctttttgaaaatgaggagcaagcaactgaggcattg
gtgtgcaaacatgctacatcgcttggcggctcgatcattcggatttccttttctcagtta
caaaacatctga
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