Nicotiana sylvestris (wood tobacco): 104216993
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Entry
104216993 CDS
T05026
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104216993
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104216993
Surveillance factors
Other surveillance factors
104216993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
104216993
NCBI-ProteinID:
XP_009765447
UniProt:
A0A1U7VBP3
LinkDB
All DBs
Position
12:58003731..58012592
Genome browser
AA seq
1550 aa
AA seq
DB search
MAEGKLDLPDDLLSSNPSDHSKGSDDSKPFMGQLDISKDQAMVDSSIPLSPQWLYAKPSD
TKMEMHPPSSLSLGSSADSSQKEAWCTDMPEDKKDWRRTPVDTESGCRWREEERETSLLG
RRERKKTDRDVNNRNSGLDTRRDSKWSSRWGPDGKEKENRSEKRIDVDKEDVHNDGQPFL
ANRAVSERESDSRDKWRPRHRMEGNFAAPGSYRAAPGFGQERGKVEGSNVGFNLGRGRSA
VTIVRPSSGGAIGASPFENSVAGKPSISAGIFCYPRGKTLDIYRMQKLGSSLCSMPENME
EEPPVTQVIAIEPLAFVVPDAEEEAVLNDIWKGKITGSGVSYNPFRKGQSMDDVTETVDT
EPNNPKQGAPSADVTEETADRLLKTSKGVEEANAYSFSYENGVKVKLDGGDNHEGQKERV
SESITADERLLSRKRTVNNDCLKVISGSKSDTSEVSLPESGVTRAPVFENIQQHVAFDVS
SKVPDDSNSLFAKSSSEIYWNNLLGRGTPPEELSLYYRDPQGEIQGPFLGADIISWFDQG
FFGTDLPVRLEDAPEDSRFFELGDIMPHLKFGHEYVGNINLSQVEPSAVLEGKLDSGLHC
SASVSEMVGSAALDGLSWPTSDFDGQNGLGGHRNQSVPDHPARQFKPPYLQNEELHDFVA
QDEEIVFPGRPGSSGNPIGKTSIGPTDPSNMHRAIPNALTGGRVPNQEEPLHPLGLLWSE
LEGTSGKSGPISDVPFSGGGQDQILNPVAARVAPFGAKTEPASTVETWTDAYRRNAVSEP
NLYQDATDASHLLHRDHELNRFELADKLFSQQLQQQHPNSLMSSHNSHLNEAMLEQGANY
NSIHQPQLASQTGQDLEHFMALQLQQQQQRQLQLQQQLQQQQQFHQQQMLLKEQQSHARQ
LLLEQLLQSQICDSSRAQSRLGSIRHNSALEQVLIKQQILSELQQRSHLPPRHAEPSIEH
LIQAKFGQIPRQGHQNDLMELLSRAKHGQLHPVEHQILQQEQVHERLRQRLEMEEDRQIG
SVWHVDETGQFLRNPAVARRANSGFGPLDIYQLQQIPLPEEHVSHLERNLSVQDRLQRGL
YDSGLLPLERTMSVPGGGPSVNLDAVNPLLRAQGLEMQDPNSRMQSAGHMPGFSTGTHAQ
SPHHPLFSNQFHAPNADTIENHWPERNGQLPVDWMETRIQQLHLNGEMQRRDFDVKRASE
DQSMWMSAGASDDSSKRLLMELLQQKSGQQSTEKAEMTRGILFERGFHSGQFSGTNASNC
SFNPLLDQDTSLNQAFSVGSYGSNSGLPPQRDHVDEIASSLNVGERLPFKSHSGALSEVE
PAFSSINDASLVYLEARESIGGQAGVMTVEGEMPVVNLLSRHSSLGTGGGNLDFYNDKSD
RGDSIAEEIPMERVTVTSKRLDNILLKRPPVLRVSSTQEGLSDLTSDTLVRSKNPSDAMA
SERGKREAGGNAANQVRDTVTSGKKDVRFRRTASCGDADVSETSFSDMLKSNAKKPAAQE
AHASEASDGTQCARSGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagggaagctcgatctccctgacgatctcctttcctctaacccttccgatcac
tccaaaggtagcgatgacagcaagcctttcatgggccagcttgatatttccaaagatcaa
gccatggtggacagcagcattcctttgtctccacaatggctttatgctaaaccaagtgac
acaaagatggaaatgcatccaccgagctctttgtcacttggaagttctgctgattcaagt
caaaaggaggcctggtgtacagatatgcctgaggacaaaaaggattggagaagaacgcca
gtggatactgagagtggttgccggtggcgtgaggaagagagggaaactagcttgcttggt
cgaagagaacgaaagaaaaccgatcgtgatgttaataaccgcaattctgggcttgataca
agacgtgatagcaagtggtcttctaggtggggtcctgatggcaaagaaaaagaaaatcgc
agtgagaaaaggatagatgtagataaggaagatgttcataatgatggtcaaccatttctc
gctaaccgtgctgtctcggagcgggagtcagattctcgtgataagtggcgtccacgccat
agaatggaaggtaactttgcggctccaggttcctatcgtgctgccccaggctttggacag
gaacgaggaaaagtagaagggtcaaatgtgggatttaacttgggtcgtgggaggtctgct
gtgactattgtaagaccttcctctgggggtgcaattggtgcttcaccatttgagaattct
gttgctggaaaaccaagcatctcagctggcatattttgttatccaagggggaaaactctt
gacatataccgcatgcaaaagcttggctcatctctttgtagcatgcctgaaaatatggaa
gaagaacccccagttactcaagtaattgctattgaaccattggcttttgttgttcctgat
gctgaggaggaggctgtcctcaatgacatatggaaaggtaaaattactggtagtggtgtt
tcttacaatccttttagaaagggtcaatcaatggatgatgtcacagaaactgtggatacg
gagcccaacaatccaaagcagggtgctccctctgctgatgtcaccgaagagacagctgat
aggttactgaaaacttcaaaaggtgttgaagaagccaatgcctatagcttttcttatgag
aatggtgtcaaggtcaagttggatggtggagataatcatgaaggacagaaagagagagtt
tctgaatctattactgcagatgaaagattgttgtccaggaagagaactgtcaataatgac
tgcttgaaagtcattagtgggtccaaatctgatacttctgaggtcagcttaccagagtct
ggagtaaccagggcccctgtctttgagaacatccaacaacatgttgcctttgatgtcagt
tcaaaggttcctgatgattcaaattccctatttgcaaagtcctcttcagaaatctactgg
aacaaccttctgggaaggggtaccccacctgaggagttgagtttgtattatcgtgatcca
cagggcgaaatccaggggccatttcttggagctgacatcatctcatggtttgaccagggt
ttttttggaactgacttgccagttcggttggaagatgcccctgaagattcacgtttcttt
gaactgggtgacataatgccccatttgaaatttggacatgagtatgttggtaacatcaat
ctttctcaggtagaaccatctgctgtactagaggggaagttggactctggtttacattgc
tcagcttctgtttctgagatggttggttctgctgccctggatggcttgagctggccgaca
tctgattttgatggccaaaatggccttggtggacatcgtaatcagtcagtacctgatcat
ccagctcgtcaatttaaaccgccttatttacaaaatgaagagcttcatgattttgttgct
caagacgaagaaattgtgtttccgggaagacctggaagcagtggcaatcctattggaaaa
acttcaataggacctactgatccttcaaatatgcaccgtgcaattccaaacgcactgact
gggggtcgagttccaaatcaggaagagccactgcacccacttggtttattatggtcagag
cttgaaggcacttcaggaaagagtggtcctatctcagatgttccatttagtggaggtggt
caggatcagattctaaaccctgttgctgcaagggttgcaccatttggtgctaagacggaa
ccagcctctactgtcgagacatggactgatgcttatagaagaaatgctgtatcagaaccc
aacttatatcaagatgctacagatgccagccacttgttgcacagggaccacgaactgaac
cggtttgagttggcagataagctgttctcccaacaacttcaacaacagcatcctaatagt
ttgatgtcttctcataatagtcatttaaatgaagcaatgctggaacaaggggcaaactat
aattcaatacatcaaccgcagttggcgagtcagactgggcaggacttggaacactttatg
gctcttcagctgcagcagcagcagcagagacagttacagcttcaacaacaactgcaacaa
cagcaacagttccatcaacagcaaatgctactgaaagagcaacagtcccatgctagacag
ctgcttcttgaacaattattgcagagtcaaatatgtgattcaagtcgtgcacaatcacgt
cttggttctattaggcataacagtgctctggagcaggtgttgattaaacagcaaattctg
agtgaactgcagcagcgttcacatcttcccccaagacatgctgaaccatctattgagcat
ctcattcaagcaaaatttggtcaaataccgcgtcaagggcatcaaaatgatttgatggag
ctcctatctcgggcaaagcatggacagctgcaccctgtggaacatcaaatccttcaacag
gaacaagtgcatgagaggctaaggcaacgtttggaaatggaggaagacagacagattggt
tctgtctggcatgtagatgaaactggtcagtttctccgaaatccagctgttgctcgtcga
gccaactctggatttggcccattagatatttaccaactgcaacagataccccttcctgaa
gagcatgtcagtcatctggaaaggaatttgtcagtgcaggatagacttcagcggggtctc
tatgactctggattactgcctttagaacgtacaatgtcagtacctggtggtggtcctagt
gttaatttggacgctgtaaatcctctattgcgtgcacaaggtttagaaatgcaagatcca
aattcaagaatgcaatcagctggtcatatgcctgggttttcgactggaacccacgcgcaa
tctcctcaccatcctttgttttccaatcaatttcacgctccgaatgcagatacaattgaa
aatcattggcctgaaagaaatggtcagttaccagttgattggatggaaactcggattcag
caactgcatcttaatggtgagatgcaaagaagggattttgatgtcaaaagggcttctgaa
gatcaaagtatgtggatgtcagctggtgctagtgatgacagttcaaagcgattacttatg
gagctgctccagcaaaaatctggccagcagtcaactgagaaagcagaaatgaccaggggg
attttgtttgagaggggctttcactctggtcagttttcggggacaaatgcttcaaactgt
tcgttcaaccctcttttggaccaggatacgagtctaaaccaagcctttagtgttgggtca
tatggttctaattcaggtttgccaccacagagagatcacgtagatgagattgccagtagt
cttaatgttggtgagagattgcccttcaaatctcattctggagctttatctgaagttgaa
cctgccttttccagcatcaatgatgcctctctggtgtatcttgaggctcgagaaagtatc
ggtgggcaagctggtgtgatgactgtagagggggaaatgccagttgttaacttgcttagc
aggcacagttcacttgggactggaggtggaaatcttgacttctacaatgacaagagtgat
agaggggattcgattgcggaggaaattccgatggaacgggtgacagtgacatcaaaaagg
ctggataatatcttgctgaagcgtccgcctgtcttacgagtttcttcgacacaggagggt
ctatctgatctaacttctgatacccttgtgagaagcaaaaatccttcagacgccatggct
tctgaaaggggcaagagggaagcgggaggtaacgcagcaaatcaagtccgtgacaccgtg
acatctggaaagaaagatgtgcggttccgacggactgcatcttgtggtgatgctgatgtt
tcagagacatcattcagtgacatgcttaagagtaacgcaaagaagccagcagctcaggag
gcacatgcatcagaggcatcggatggaacacaatgtgcccgtagtggtaagaagaaagga
aagaaaggaaggcagattgatcctgctcttcttggattcaaggttacaagcaatcgcatc
atgatgggtgagatacaacggatagaagattag
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integrated database retrieval system
