Nicotiana sylvestris (wood tobacco): 104217132
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Entry
104217132 CDS
T05026
Name
(RefSeq) DNA topoisomerase 3-beta isoform X2
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03440
Homologous recombination
nsy03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104217132
03460 Fanconi anemia pathway
104217132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsy03032
]
104217132
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104217132
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104217132
DNA replication proteins [BR:
nsy03032
]
Eukaryotic type
DNA Topoisomerases
104217132
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104217132
FA (Fanconi anemia) pathway
104217132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
DUF7560
Motif
Other DBs
NCBI-GeneID:
104217132
NCBI-ProteinID:
XP_009765587
UniProt:
A0A1U7VC31
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Position
1:6738231..6754242
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AA seq
864 aa
AA seq
DB search
MAPKVLMVAEKPSIALSIASVLSGAQMSTRRGSTEVHEFDGMFLGSRAHYKVTSVIGHVF
SVDFPAAFQDWANTNPSDLFQAPILKKESNPKAHICRHLSQEARGCSHLVLWLDCDREGE
NICFEVIECTGFHTSDGRRIYRARFSSVTEKDILKAMNSLVDPNRDEALAVDARQEIDLK
VGVAFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRYLQITMFKPEKFWMLHPYI
MYKGYELKLEWERGRLFDADVAAMFRNRLMEDGTMRVVRVSEKLESKGRPSGLNTVNLLK
VASSALGFGPQLTMQLAERLYTQGFISYPRTESTAYPSSFDFRGTLVALVHNPVFGGYAQ
KLLTESYNKPRAGTDAGDHPPITPMRSAIEDSLGNDAWKLYQYICQHFLGTLSPDCRYRR
IKVEFESGGEQFQCIGQLVTVKGFTSIMPWLAISEKNLPDFAEGEKIEISKVDLDEGNTS
PPDYLNESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLVPTPLGISLIRGYQ
CIDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLDQFRRKFSYFVKQIENMDALFEA
QFSPLSDSGRLLSKCGKCLRYMKYISTQPSRLYCGTCEEVYYVPQKGTVKLYKELTCPLD
NFELLLCSMPGPEGKSFPLCPYCYNCPPFEGIDTFFGAPKTGDSSKLGKGVGMPCFLCPH
PTCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLCCNMCNCLVSLPEGAHRISTTQDKCP
ECESTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRSGRGRGKG
RGGYRGRGRGNNKQQDPKMSFRDF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaaagttctcatggtagcagagaagcctagtattgctttatcaattgcctca
gttttatctggtgctcaaatgtccacacgaaggggtagtacagaagtccatgagtttgat
gggatgtttcttggatcacgtgcacattataaagtgacttcagtgattggtcatgttttc
agtgtagattttccagccgcttttcaagattgggcaaatacaaatccttcagatcttttc
caggcaccgatacttaagaaggaatcaaacccgaaggctcatatttgtaggcatctaagc
caggaagctcgtggttgttcacatctggtactatggttggattgtgatcgtgaaggagaa
aatatatgctttgaagtcatagaatgcactggatttcacacaagtgatggtagaagaata
taccgcgctcgattctcatctgttactgaaaaagatattctgaaggcaatgaacagcctt
gttgatcccaacagagatgaggcattggcagtagatgcacgtcaagagattgatttgaaa
gttggagttgcatttacacgtttccagactagctatttcaacgggaaatatggaaatctt
gatgcaagggttatctcctacgggccatgtcaaactcctacacttggattctgtgtggat
cgttacctgcaaatcactatgttcaagccagaaaagttttggatgctgcatccatacata
atgtacaaggggtatgaactcaaattagaatgggaacgtggcaggttgtttgatgctgat
gttgctgcaatgtttcggaacagactaatggaggacgggactatgagagttgttcgtgta
tcagaaaagctggaatctaaaggtcgtccttctggtctaaacacagtaaatcttctaaag
gtagcttcaagtgcactgggcttcggtcctcagttaactatgcaattggctgagcgtctg
tatactcaaggttttatcagctatccacgtacagagagcacagcatatccttcttcgttt
gacttcagaggaacactagtagcattggtgcataatcctgtatttgggggttatgcgcaa
aagcttttaactgaaagttataataagccgcgggcaggaactgatgcaggtgatcatcct
ccaataactccaatgcgttcagctattgaggatagtttggggaatgatgcatggaaactg
taccagtatatctgccagcattttctgggaactctctctcccgattgcagatatagaagg
ataaaggttgaatttgaaagtggcggagagcaatttcagtgcattgggcagcttgtcaca
gtcaaaggattcacctctattatgccatggctggctattagtgagaagaatcttcctgac
tttgctgaaggagagaaaatcgagatttctaaagttgatctagatgaggggaatacttcg
cctccagattacctcaacgaaagtgagctgatctctttgatggagaaacatggtattgga
acagacgcgtcaatctctgtgcatattaacaacatatgcgaacgcaactatgtccaggta
caagctgggcgaagattggttccaactcctctgggcatcagcttgataagagggtaccaa
tgcatagattctgatctctgtttgcctgacatacgaagtttcattgagcatcagatcact
ttggtagctaaaggtcaagcagatcattcaatggttgtgcagcatgtactagatcaattc
cgaaggaagttcagctattttgttaagcagattgaaaatatggatgcattatttgaagca
caattttcaccactatctgactctggacgtctccttagcaaatgtggcaaatgcttgcgg
tatatgaaatacatatctactcagccatctcgactgtactgtggtacatgtgaggaagtt
tattacgtacctcagaagggaacagtcaagctgtacaaggagcttacttgccccctggat
aattttgagctgttattatgtagcatgccaggtccagaaggcaagtcattccctctgtgt
ccttattgctacaactgtcccccatttgaaggcatcgatacattttttggtgctcctaaa
accggtgattcttccaagttggggaagggagttggaatgccttgtttcctctgtccacac
cccacatgtccgcattccgtgattgcacaaggcgtttgtgcttgcccagaatgcagcggt
acacttgttcttgatcccgtcagtgctcccaaatggaggctttgctgcaacatgtgcaat
tgccttgtttccttgcctgaaggcgctcatcggatttctacaactcaggataagtgtcct
gaatgcgaatcaactatcatagaagtcgacttcaacaagaaaacaactcccttaaaagat
ggagcgacgctccacaagggatgtattctctgtgacgagctgctgcattcactcgtggaa
atgaaacatggaagatcgttttctaggcatggaaggagtggacgaggtagaggaaaagga
aggggaggttatcgaggaagaggacggggcaacaacaaacaacaagaccctaaaatgagt
ttccgagatttctaa
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