Nicotiana sylvestris (wood tobacco): 104217335
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Entry
104217335 CDS
T05026
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104217335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104217335
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104217335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
104217335
NCBI-ProteinID:
XP_009765857
UniProt:
A0A1U7VTY2
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All DBs
Position
8:complement(6922063..6929309)
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AA seq
477 aa
AA seq
DB search
MMESDLGKLFIGGISWDTDEDRLKEYFGSYGEVVEAVIMRDRNTGRARGFGFVVFSDPAV
AERVVKEKHMIDGRTVEAKKAVPRDDQQIIINRNNSSIQGSPGPGRTKKIFVGGLASTVT
ESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDRTLYKNFHELNGKMVEV
KRAVPKELSPGPSRSPLPMGFNYGLNRANNFLNNYATHGYNLTSVGGYGVRMDGRYSPVA
GGRTGFSQFASPGYGMGVNLDPSLSPTFAGASNFSNNLGYGRILNPYFTGNSSRYTTPIG
YSTSSNRGESFLSSPTRNLWGNIGLNSSANSGGPGSYVGSASGNYAVFGNNSGNWGASLI
SAPGGNSSGYGGGNFRSGENNYGLGSGGLGRNNAAGAATTSSFTAPTGAYEGSYGDQFRG
GSVYGDRAWQAVSSHADGSGSFEYGLGNPADVSAKDSEDYIGNYSIANRQSNRGIAA
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcagatctcggtaagctatttataggtgggatttcttgggatacggatgag
gatcgtcttaaagaatatttcgggtcatatggagaagtggtggaagctgtgatcatgaga
gatcgtaatactggccgtgctcgtggttttggttttgtagtcttttctgatcctgctgtt
gctgaaagagtggttaaggagaagcacatgatcgacgggcgaacggttgaggcaaagaag
gctgttcctagggatgatcaacaaataataataaatagaaacaatagcagcattcaagga
tctccaggtcctggacgcacaaaaaagatatttgtaggaggcttagcatctacggtcacg
gagagtgattttaagacatattttgatcagtttggtacaattacagacgtcgtagtgatg
tatgaccataatactcagaggccaagagggtttggatttataacttatgattcagaggat
gcagttgataggacattgtacaagaattttcatgaactaaatggtaaaatggtggaagta
aagcgcgctgttccaaaggagctatctccgggccccagccgcagccctctccccatggga
ttcaactatggactcaatagagccaacaacttcctcaacaactatgctactcacgggtat
aatctaacttcagtcggaggatacggggtcagaatggatggcaggtatagtcctgttgcc
ggtggtcgtactggtttctctcagttcgcttctcctggttatggaatgggtgtcaatttg
gatccctctttgagccccacctttgcaggagcttccaactttagcaataatcttgggtat
gggcgaatattaaacccgtatttcactggaaattcaagcagatacactactcctattgga
tatagcacaagcagcaatagaggggagtcttttctaagctccccaacgaggaatttatgg
ggaaatattggccttaactcttcagcaaattctggtggcccgggttcatatgtgggctcc
gcaagtggtaattacgctgtctttgggaataacagtggtaactggggcgcttctctcatt
tctgctccgggtggtaattcttccggatacggtggtgggaatttcaggagtggggaaaat
aattacggcctggggtcgggcggacttggaagaaataatgcagcaggtgctgctactact
tcatcgtttacagcaccaactggcgcttatgaggggtcttacggagatcaattccgcggc
ggttcagtgtacggtgatcgagcttggcaagctgtgtcttctcatgcagatggttctggt
tcatttgaatatggtcttggaaatccagcagatgtttctgctaaagattctgaggattat
attggaaattacagtattgcaaatagacaatcgaatagaggaatcgcagcatag
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