KEGG   Nicotiana sylvestris (wood tobacco): 104217384
Entry
104217384         CDS       T05026                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040  Pentose and glucuronate interconversions
nsy01100  Metabolic pathways
Module
nsy_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    104217384
Enzymes [BR:nsy01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     104217384
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim NosD Beta_helix
Other DBs
NCBI-GeneID: 104217384
NCBI-ProteinID: XP_009765923
UniProt: A0A1U7VHU9
LinkDB
Position
6:61165056..61167713
AA seq 397 aa
MRKMSLLENLPLFFTILFLILNSSIAANAIYNVKNYGAKSNGKIDSSKAFLSAWAAACAS
TSPATIYVPKGSYLLKSAYFQGETCKSKAITLHIDGTILAPSDYNANRNEENWMKFERVT
GVSIYGGTLDGQGASLWACKTSSKNCPQGTMGLTFSNSSNIDISGLTSKNSQMFHILVDN
CDNVKLQGVKVSAPGNSPNTDGIHVQYSSKVTIMNSHIGTGDDCISIGPGTSNLWIENIA
CGPGHGISIGSLGWELEEPGVQNVTVKTVTFSGTQNGLRVKTWARSSNGFVKNVLFQHIV
MANVQNPIIIDQNYCPNNENCPHQGSGVKISNVKYQDIRGTSATEVAVKFDCSKKYPCSG
ISIEDVNLSYRDQPAEASCVNAGGRASGSVKQTSCLG
NT seq 1194 nt   +upstreamnt  +downstreamnt
atgaggaaaatgagtttactagaaaacctcccactttttttcacaatcttgttcttgatc
ttaaactcttccattgctgcaaatgcaatatataatgtcaaaaactatggagcaaaatcc
aatggaaaaatcgattcatccaaagcttttctgagtgcatgggctgcagcatgtgcatct
actagccctgccaccatttacgtgccaaagggaagttacttgcttaaaagtgcatatttt
caaggtgaaacatgcaagagcaaggctattaccttacacattgatggcactatattagct
ccatcggattataatgccaatcggaatgaagaaaattggatgaaatttgaaagagtcact
ggagtttccatatatggtggaaccttagatggacaaggtgctagtctttgggcttgcaaa
acctctagcaagaattgtcctcaaggaacaatgggacttactttttccaactccagcaac
atagatataagcggattaacatcgaaaaacagccaaatgttccacatattggtagataat
tgtgataatgtgaagctacaaggagtaaaggtatcagctccaggaaacagtcccaacacc
gatggtattcacgtccaatattcgtctaaagtcaccattatgaactcccatattggaact
ggagatgattgtatctcaattggccctggaacctccaacttatggattgaaaacattgcc
tgtggccctggccatggaataagcattggaagtttaggctgggaactagaagagcctgga
gttcaaaatgttacagttaaaacagtcacgttcagtggaacacaaaatggattgagagta
aaaacatgggcaagatcaagcaatggcttcgtcaaaaatgttctcttccagcatatagtt
atggctaatgttcaaaaccctatcattatagaccaaaattattgccctaacaatgaaaat
tgccctcatcagggctcgggtgtgaaaatcagcaacgtaaagtatcaggacatacgcggt
acatctgctacggaagttgcagtgaaatttgattgtagcaaaaaatatccatgcagtggc
atatcaatagaagatgtaaatcttagctatagagatcaacccgctgaagcttcttgtgtt
aatgctggaggaagagcttctggttctgtaaaacaaactagttgcttaggttag

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