Nicotiana sylvestris (wood tobacco): 104217384
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Entry
104217384 CDS
T05026
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Module
nsy_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104217384
Enzymes [BR:
nsy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
104217384
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104217384
NCBI-ProteinID:
XP_009765923
UniProt:
A0A1U7VHU9
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Position
6:61165056..61167713
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AA seq
397 aa
AA seq
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MRKMSLLENLPLFFTILFLILNSSIAANAIYNVKNYGAKSNGKIDSSKAFLSAWAAACAS
TSPATIYVPKGSYLLKSAYFQGETCKSKAITLHIDGTILAPSDYNANRNEENWMKFERVT
GVSIYGGTLDGQGASLWACKTSSKNCPQGTMGLTFSNSSNIDISGLTSKNSQMFHILVDN
CDNVKLQGVKVSAPGNSPNTDGIHVQYSSKVTIMNSHIGTGDDCISIGPGTSNLWIENIA
CGPGHGISIGSLGWELEEPGVQNVTVKTVTFSGTQNGLRVKTWARSSNGFVKNVLFQHIV
MANVQNPIIIDQNYCPNNENCPHQGSGVKISNVKYQDIRGTSATEVAVKFDCSKKYPCSG
ISIEDVNLSYRDQPAEASCVNAGGRASGSVKQTSCLG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaatgagtttactagaaaacctcccactttttttcacaatcttgttcttgatc
ttaaactcttccattgctgcaaatgcaatatataatgtcaaaaactatggagcaaaatcc
aatggaaaaatcgattcatccaaagcttttctgagtgcatgggctgcagcatgtgcatct
actagccctgccaccatttacgtgccaaagggaagttacttgcttaaaagtgcatatttt
caaggtgaaacatgcaagagcaaggctattaccttacacattgatggcactatattagct
ccatcggattataatgccaatcggaatgaagaaaattggatgaaatttgaaagagtcact
ggagtttccatatatggtggaaccttagatggacaaggtgctagtctttgggcttgcaaa
acctctagcaagaattgtcctcaaggaacaatgggacttactttttccaactccagcaac
atagatataagcggattaacatcgaaaaacagccaaatgttccacatattggtagataat
tgtgataatgtgaagctacaaggagtaaaggtatcagctccaggaaacagtcccaacacc
gatggtattcacgtccaatattcgtctaaagtcaccattatgaactcccatattggaact
ggagatgattgtatctcaattggccctggaacctccaacttatggattgaaaacattgcc
tgtggccctggccatggaataagcattggaagtttaggctgggaactagaagagcctgga
gttcaaaatgttacagttaaaacagtcacgttcagtggaacacaaaatggattgagagta
aaaacatgggcaagatcaagcaatggcttcgtcaaaaatgttctcttccagcatatagtt
atggctaatgttcaaaaccctatcattatagaccaaaattattgccctaacaatgaaaat
tgccctcatcagggctcgggtgtgaaaatcagcaacgtaaagtatcaggacatacgcggt
acatctgctacggaagttgcagtgaaatttgattgtagcaaaaaatatccatgcagtggc
atatcaatagaagatgtaaatcttagctatagagatcaacccgctgaagcttcttgtgtt
aatgctggaggaagagcttctggttctgtaaaacaaactagttgcttaggttag
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