Nicotiana sylvestris (wood tobacco): 104217395
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Entry
104217395 CDS
T05026
Name
(RefSeq) dicer-like protein 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nsy03036
]
104217395
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104217395
microRNA pathway
RISC loading complex
104217395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
Helicase_C
ResIII
DND1_DSRM
dsrm
PAZ
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
104217395
NCBI-ProteinID:
XP_009765934
UniProt:
A0A1U7VU57
LinkDB
All DBs
Position
Unknown
AA seq
1624 aa
AA seq
DB search
MEGGDFENGTESPPSAATSPITEQLSALSLNGDIDSPVSVQKPEKDPRKIARKYQMDLCK
KALEENVVVYLGTGCGKTHIAVLLIYEMGQLIRKPQKSICVFLAPTVALVQQQAKVIEDS
IDFKVGTYCGKSKHLKSHEDWEKEMEQYEVLVMTPQILLHNLSHCYIRIEFIALLIFDEC
HYAQVESDHPYAEIMKIFYKPDVVKLPRILGMTASPISGKGATVEGLETLLRSKVYSVED
KDELEQFVASPKVNVYYYGPGAACLTKAYSQKLEEIKHQCVMVLHKKAVDHSTLRNTKKM
LKRLHGHLIFSLENLGVFGALQASCILLKGDHYERHQMVEADVNASDDSLCDRYLSQVAT
MFTSGCAKDGMNPDLTLVEVLKEPYFSKKLLRLIGILSNFGVQPDMKCIIFVNRIVTARS
LSYMLQHLKVLSSWKCGFLVGVHSGLKSMSRKNTNIILNKFRSGELNLLVATKVGEEGLD
IQTCCLVIRFDLPETVASFIQSRGRARMPKSEYAFLVDSDNQRELNLIEHFSRNEARMND
EISSKKSCSTVIDFQENIYKVDMTGATISSASSISLLHHYCSKLPRDEFFCPKPQFFYFD
DIDGTICKLVLPSNAPMHQIVSAPQSSIEAAKKDACLRACKSLHELGALTDYLLPDQADE
DLIHVFSDSESSDGEDAREELHEMIVPAAFKEPWTETESPVCLNSYYINFSPCPIDRVYK
KFGLFLKAPLPQEAERMKLNLNLARGRSVETELIPSGATNFENNEQVQLAEKFQRMFLKI
ILDRSEFISEFVSLEKQDYVDSASKSYLLLPLNLCGHNKISVDWELVRRCLSSPIFGTSV
YAGNSEISKFDEQLQLANGSKSVHDVANSLVYVPCKDTFFFISDVVKESNAYSIYKDSKN
HVKHYYDTFGIHLSYPEQPLIKAKQLFCLDNLLRKKGYSELRDKEEHFVELPAEICQLKI
IGFSKDIGSSLSLLPSIMHRLESLLVAIELKGCLSASFPEGREVTIDHVLEALTTEKCNE
PFSLERLEVLGDAFLKFAVGRHVFLTYDAFDEGQLTRRRSNIVNNSYLYTIAVRNNLQAF
IRDQSFDPNHFYAVGRPCPVICDKQTEKNIHGQCGSVTDGAKTEVRCSKCHQWLRKKTIA
DIVEALVGAFIVDSGFKAAIAFLKWIGIYTDFEESQVKSICAASKVFMPLADEIDIPAIE
NLLGYPFVHKGLLIQAFIHPSYNNHGGGCYQRLEFLGDAVLDYLITSYLYSVYPKLKPGQ
LTDLRSVSVNNNTFAVVAVHQSFHSHILCDYSSGLRESITRYVNFIGRPDSMKRLAEEPS
CPKALGDLVESCMGAILLDTGFDLNRAWHIMLSFLKPVMSFTRLQLNPKRELHELCQSYG
WHLKFLASKKDSKYLVEAKVNGENVSEAASALNINKKAAARMAAQQVHSSLKAQGYRRKS
KSLEQVVKTAKKMEAKLIGYDEIPCVLTARCNDVEKNEASESDRDLKAFPISEQLARNCN
FKLKPARKLAPEAAVQCNSEQTIMPNGSNSDSKATGGAINGSAKSILHEVCAANCWKPPR
FECCKETGPSHLKEFTFRVVVEIEETSRVIESCGAPRAKKKDAAEDAAEGALWFLKHEGY
MFDN
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggcgactttgagaacggcactgagagtccaccaagtgctgcaacttcaccg
atcactgagcagctttctgctctgtctctcaatggcgacatagattctcctgtttcagtt
cagaaaccagagaaagaccccagaaaaattgctagaaagtatcagatggatctttgtaaa
aaagcattagaggagaatgttgttgtatatctgggaacgggctgtgggaaaactcatatt
gccgtcttgcttatctatgagatgggacagctgattaggaaaccccagaagagcatttgc
gtgtttcttgctcccactgtggcgttggtgcaacagcaagccaaggtcatagaagactct
attgacttcaaagttgggacatactgcgggaaatccaagcatttgaagagccacgaagac
tgggaaaaagaaatggaacagtatgaggtccttgttatgacccctcaaatactattacat
aatctttcccactgctatatcaggattgaatttattgctcttctgatctttgatgagtgc
cactatgcacaagttgagagtgatcatccttatgctgagattatgaagatattttacaaa
cctgatgtagtaaaactgccccgtatacttggcatgactgcatctccaatatcaggaaaa
ggtgctactgttgaaggccttgagaccttacttcgctctaaggtgtattctgttgaagac
aaggatgaactggaacagtttgttgcatcacctaaggtgaatgtatactactatggtcct
ggcgccgcgtgtcttactaaagcttactctcagaagcttgaagagataaaacaccagtgt
gtgatggtgcttcacaagaaagcagttgatcatagcacactcaggaacacaaaaaagatg
ctcaagagattgcatggacatctaattttttctctggaaaacctaggtgtctttggggca
ttacaggctagttgcatcctcttaaagggggatcactatgagcgccatcaaatggtggaa
gctgatgttaatgctagtgatgactctttgtgtgacagatatctgagtcaggtcgccaca
atgtttacttctggttgtgctaaagatggtatgaatcctgatttgacacttgtggaagtt
ctgaaggagccttatttctccaaaaagcttttacgtctaattggaatcctttccaacttc
ggggtacaaccagatatgaagtgcataattttcgtcaataggatcgtgactgcgagatct
ctttcttatatgcttcagcatctgaaagttttatcttcttggaaatgcgggtttcttgta
ggagtgcactcaggattgaagagtatgtcacgaaaaaatacaaatatcattctcaataag
ttccgttctggtgagctcaacttattggttgccaccaaagttggcgaggaaggacttgat
atccagacatgctgccttgttatacgatttgatcttcctgaaactgttgccagttttata
cagtctagagggcgtgcccgcatgccaaagtctgaatatgcatttttggttgatagtgat
aaccaaagggagcttaatttgattgagcatttttcaagaaatgaagctcggatgaatgat
gagatttcttccaagaaatcttgctcgacagttatagattttcaagaaaatatatacaaa
gtagatatgactggtgcaaccatcagttctgcatcaagcatttcgttgcttcaccattat
tgttccaagcttccacgtgacgagtttttctgccccaagccgcagttcttctactttgat
gacatagatggaactatttgcaaattagttttgccttcaaacgctccaatgcatcaaatt
gtgagtgctcctcaatcttctatagaagcagctaagaaagatgcctgtttaagagcctgc
aagagcttgcatgaacttggagcactcactgattatcttttgccggatcaagcagatgaa
gacctgattcacgttttttctgactcagaaagctcagatggcgaagacgcacgagaagag
ctccatgagatgattgttcccgctgcctttaaagaaccatggactgagacagagagtcct
gtttgccttaactcgtactacatcaacttttcaccttgtccaattgatagggtttataaa
aagtttggcctatttttgaaagcacctcttccccaagaggctgagagaatgaaacttaat
ctcaacttggctcgaggtagatctgtagagacagagcttattccatcaggagctactaat
tttgagaacaatgagcaggtacaactagcagagaagttccagagaatgttcctcaagatc
attcttgaccgctctgagttcatttcagaattcgtatctttggaaaaacaagattatgtt
gactcagcttcaaaatcttacctacttcttccactcaatttatgtggacacaataaaatt
tccgtggactgggagcttgtcagaagatgcttgtcatcaccaatttttgggacttcagta
tatgcaggcaatagtgagatatccaaatttgatgagcagttgcaacttgccaatggttcc
aaaagcgtacatgatgttgccaatagtttggtatatgttccatgcaaggatacatttttc
ttcatatctgatgttgtcaaagaaagcaatgcatacagcatatataaagattcaaaaaac
catgtcaaacactattatgatacttttggtatccatctttcgtaccctgagcaaccacta
ataaaagcaaaacaactcttctgtttggacaacttgctacgaaagaaaggctattcagag
ttgcgtgataaagaggagcactttgttgaactacctgctgaaatttgccagctcaagata
attgggttttccaaagatattgggagctcattatcactgttgccatcgatcatgcatcgt
cttgaaagcctacttgtcgctattgaactaaagggctgcctatctgcttctttccctgag
ggaagggaagtaacaatcgatcatgttcttgaagcacttactacagagaaatgcaatgaa
cctttttctcttgaaaggcttgaagtgcttggtgatgcatttctcaagtttgcagttggg
aggcatgtctttcttacatacgatgcctttgacgaaggacagttaactagaaggcgctca
aacattgtgaacaattcctatctgtacacgatagcagtcagaaacaatttacaggcattt
attcgtgatcaatcatttgatcccaaccacttctatgcagtaggccgtccgtgccctgta
atctgtgacaaacaaacagaaaaaaacatacacggtcaatgtggtagtgtaacagatggt
gcaaagactgaagttaggtgtagcaaatgtcatcagtggttgcgtaagaaaacaattgct
gatatagttgaagcccttgttggcgcttttatagttgacagtggcttcaaagcagcaatt
gcatttcttaaatggattggtatctatacagatttcgaagaatcacaagtaaagagtatt
tgcgctgcaagcaaagtctttatgccacttgctgatgaaatagatattccggccattgaa
aatttattaggttatccattcgtccataagggtttgctcattcaggccttcatccatcca
tcttataacaaccacggaggaggttgctatcagagactggagtttcttggagatgctgtc
ctcgattatttgatcacatcctatctatactctgtgtacccaaaactgaagcctggccag
ttgactgatctgagatcagtttctgtaaacaacaacaccttcgcagttgttgcagtacat
caaagcttccacagccatatactctgtgattatagtagtggcctccgtgagtcaattact
agatatgtcaatttcattggaagaccagattctatgaaaaggttggctgaagagccatct
tgtccaaaggcccttggcgacctggtggagtcttgtatgggtgcaatcctgcttgacaca
gggtttgacttgaaccgtgcttggcatataatgctctccttcttaaagcccgtcatgagc
tttaccaggttgcagcttaatccaaaaagagaactccatgaactttgccagtcttatggc
tggcatctaaagttcctggcttcaaaaaaagatagcaaatatctagttgaggccaaggtg
aatggggagaatgtttctgaagcggcttctgctctcaatatcaataaaaaagctgccgca
agaatggctgcccagcaagtacattcaagcttgaaggctcaaggctataggcgcaagtct
aaatcactggagcaagtggtaaaaacagctaaaaagatggaagctaaactgataggatat
gatgaaataccctgtgttcttactgctaggtgcaatgacgtggagaagaacgaagcatct
gaaagtgatcgtgacttgaaagcatttcctattagtgagcaacttgcaagaaattgcaat
ttcaagttaaagcctgcgagaaagttggccccagaggcagctgtacaatgcaattctgag
cagaccatcatgcctaatggctctaattcagattcaaaagctacaggtggtgcaataaat
ggatcggcaaagtcaattttgcatgaagtttgtgctgccaactgctggaaacctcctaga
tttgaatgttgcaaggagacagggccaagccacttgaaagagtttacttttcgggtggtg
gtggaaattgaagaaacatcaagagttatagagtcttgtggagctcctcgggcgaaaaag
aaagatgcagctgaggatgcagcggaaggggcactttggttcttgaagcacgaaggatac
atgttcgataactga
DBGET
integrated database retrieval system