Nicotiana sylvestris (wood tobacco): 104217493
Help
Entry
104217493 CDS
T05026
Name
(RefSeq) small RNA degrading nuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104217493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104217493
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
Pre-60S particles
RNases
104217493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
THP2
KIP1
Motif
Other DBs
NCBI-GeneID:
104217493
NCBI-ProteinID:
XP_009766067
UniProt:
A0A1U7VDA7
LinkDB
All DBs
Position
4:94019233..94032766
Genome browser
AA seq
573 aa
AA seq
DB search
MSCQNSKTEETADEQHNTSKDPKHKPFFDVYGPQGRADIVFNQPESNSTLNLQDVQGLVT
WVLADGFMPSWAFIKNKPLIPKVVMLYVPGLDAALYLSQSKVLKGFKECCGIPRPVLALS
CVSDGNQTIDALLTYKSKRKRKEAEHISPINTEPSEQGAETPTMEPLSFVDLKKDIPFPI
SYYTLTDKELEENGYCYDQPEFLSTLPAPSGTSPHEILALDCEMCITREGFELTRVTLVD
VKGQVLLDKLVKPSNNIVDYNTRYSGITCQMLEDVTTTLKDIQEEFLKLVYKETILVGHS
LENDLLALKIIHNLVIDTAVLYKHPRGSYKAALRVLSRKFLGREIQDSGNGHDSIEDAKA
TLELALLKIKNGPDFGIPQCQRLLRQKLLSVLSDSGKKSSIIDHISIVRRYAAELSHTIP
VSSDDEALSKANKEVRNDKVQFIWTQFAELYAYLRKQADDPEKLNKKLAEMIALLTCEKK
STSRRNVKYDVTPELKDILSHMNRRVRSIYSNLPLNAMLIICTGHGDTAIVQRVRKILSE
QTDASMSRENIVKVLGELQAQAEVGLCFVGVKH
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagttgccagaacagtaaaacagaagaaacggccgacgagcaacacaataccagcaaa
gaccctaaacacaaacccttctttgacgtttacggccctcaggggagggcagatattgtt
ttcaatcaaccggaatccaattcaactttgaatcttcaagacgtgcaaggtcttgtcaca
tgggtgcttgctgatgggttcatgccgtcatgggcttttatcaaaaacaagcctttgatc
cctaaagtggttatgctgtatgttcctggccttgatgccgctctatatttgtcacagtct
aaagtgctcaaaggtttcaaagaatgctgtggtattccgaggccagttttagctctgagc
tgtgtatcagatggaaatcagacaatagatgcactccttacgtacaaatcaaagaggaaa
aggaaagaagctgagcacatttcaccaataaacaccgagccttctgaacaaggtgctgag
actcccactatggagcctctatcttttgttgacctcaaaaaggatataccatttcccatc
agttattacacacttacggataaggaactagaagaaaatggatactgttatgaccaacca
gaatttctttcgacgctccctgctccttcaggaacatctccacatgaaattttggccctt
gactgcgagatgtgtattacaagggaaggctttgagcttaccagagtgacactagtggat
gttaaaggacaggttctgctggataaattggtcaaaccatcaaacaacattgttgactac
aatactaggtatagtggaattacttgtcagatgttggaggatgtgactaccactcttaaa
gatatccaggaggagttcttgaaactggtttacaaggagaccattctggttgggcattcc
ttggaaaatgatttgttagccctgaagatcattcataatttggtaatagatactgctgtg
ttgtacaaacatccaagaggatcctacaaagctgctcttcgcgttctgagcagaaaattt
ctcggcagggagatacaggactcgggcaatgggcatgacagcattgaagatgcaaaagct
acactggaactagcactactaaaaataaaaaatgggcctgattttggtatacctcaatgt
caacgattactgcggcagaagcttctttcagttctgagtgactctggcaaaaaatcctca
atcattgatcatatttccatagtgaggagatatgctgctgaattgtcccatacaattcca
gtatcatctgatgatgaagcactttcaaaagccaacaaagaggtcagaaatgataaagta
cagtttatctggacgcaatttgcagagttatatgcatatctcaggaagcaagcagatgac
ccggagaagctaaataaaaagttggcagaaatgatagcattgctgacgtgtgagaaaaag
tctactagcagaagaaatgtcaaatatgatgtcacccctgaactgaaggacattctgagc
cacatgaatcgtagagtcaggagcatttactccaatcttcctctaaatgcaatgcttatt
atttgcactggtcatggagacactgcaatagttcaaagagtgaggaaaatcttgtcggag
cagacggatgcctcaatgtcccgtgagaatattgttaaagtcttaggagagttgcaggca
caagctgaagttggtttgtgctttgtaggtgtcaaacattga
DBGET
integrated database retrieval system
