Nicotiana sylvestris (wood tobacco): 104218002
Help
Entry
104218002 CDS
T05026
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like isoform X1
KO
K04523
ubiquilin
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104218002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104218002
03051 Proteasome [BR:
nsy03051
]
104218002
Membrane trafficking [BR:
nsy04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
104218002
Proteasome [BR:
nsy03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
104218002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
Rad60-SLD
UBA
STI1-HOP_DP
UBA_7
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
SIL1
Motif
Other DBs
NCBI-GeneID:
104218002
NCBI-ProteinID:
XP_009766695
UniProt:
A0A1U7VXI7
LinkDB
All DBs
Position
2:157463912..157471600
Genome browser
AA seq
547 aa
AA seq
DB search
MGGGDTTTTTVKDEVAENNAGGGGETVTINVRCSNGSKFSVQVSLDSTVGSFKSVLSQPS
DIPAEQQRLIYKGRILKDDQTLTSYGLEADHTVHLVRGFAAAASASATNAGNPNTNQNIP
GDAPPNVGGPFAGVGGAPLFPGLGSGGGPFGAGLPDFEQVQQQLTQNPDMMRDMMNMPLV
QNLMNNPEIIRNLIMNNPQMREIMDRNPELAHILNDPSTLRQTMEAARNPEIMREMMRNT
DRAMSNIESSPEGFNMLRRMYENVQEPFLNATTMAGDTRNDSGANPFAALLGAQGGQAGN
QATSPPVTGSETTANPPAPNTNPLPNPWASAGTGAAQMNTTARSNAAADTRAPPLGGLGA
LPDLQRMLGGMPDASSLNQLMQNPAISQMMQSLLSNPQYMNQISGFNPQLRSMLDSNPHL
REMMQNPEFIRQLTSPETMQQVMSLQQGLLSQLGRQQTNQGQGQDTGRTAFDNMGMEMLM
NMFGGLGTGGLGVPNRSNVPPEELYATQLAQLQEMGFFDTQENIRALIATAGNVHAAVER
LLGNTGQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaggcgatactactactacaacggtcaaagatgaagtagccgagaataacgcc
ggcggtggtggtgaaacagttacgatcaacgttcgatgttccaatggctccaaattttcc
gttcaagtgagcctcgattccaccgtcggatcattcaagtccgtcctttctcagccgtcc
gatatccctgccgaacagcagaggttgatctataaaggccggatcttaaaggacgaccaa
accctaacaagctacggtctggaggcagatcacacagttcatctggttcgaggttttgcc
gctgctgcttccgctagtgcaaccaatgctggaaatccaaatactaatcagaatatacca
ggggatgccccgccaaatgtaggggggccatttgcaggagtaggtggagctccactcttt
cccggacttggaagtggtggtggtccgtttggagctggtcttccagattttgagcaagtc
cagcagcagctgactcaaaaccccgacatgatgagagatatgatgaatatgcctcttgtt
cagaatctaatgaataacccagaaatcatccgcaacttgattatgaacaatcctcaaatg
cgagagatcatggatcgtaatcccgagcttgctcacatactcaatgacccttctactctt
cgccagacaatggaggctgcacgaaaccctgaaattatgcgtgagatgatgcgcaatact
gacagggcaatgagcaacattgaatcctctcctgagggatttaacatgctaaggcgcatg
tatgaaaatgttcaagagccatttctgaatgcaacaaccatggctggagatacaagaaat
gattcaggtgcaaacccgttcgcagctcttttgggagcccaaggtgggcaagccggaaat
caggcaactagtcctccagttactggttctgagacaactgctaatcctcccgctcccaat
actaatccacttccgaatccttgggcatcagctggcactggagccgcccaaatgaatacc
actgctaggtcaaatgctgctgcggatactagggcaccccctcttggtggcttgggcgct
ttgccagatttgcagcgaatgctaggcggcatgcctgatgcctcttctctaaatcagtta
atgcagaatccagccatctcacagatgatgcagtctctcctctcaaatcctcagtacatg
aaccagatttctgggttcaacccgcagctaagaagcatgcttgattccaacccccatctc
agagaaatgatgcaaaaccctgaatttattcgtcagttgacgtcccctgagacaatgcag
caagttatgagtctacagcaagggctattgtctcaacttggtcggcagcaaacaaaccag
ggacagggtcaagatactggccgaacagcatttgacaacatgggaatggaaatgctgatg
aacatgttcggtggacttgggacggggggattgggtgtacccaacagatccaatgtgccc
ccagaggaattatacgccactcagttagcccagttacaagaaatgggtttttttgacact
caagaaaatatccgggcacttattgccactgcagggaatgtgcacgctgcggtagagcga
cttctagggaacactggacagtag
DBGET
integrated database retrieval system
