Nicotiana sylvestris (wood tobacco): 104218726
Help
Entry
104218726 CDS
T05026
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nsy04131
]
104218726
04121 Ubiquitin system [BR:
nsy04121
]
104218726
Enzymes [BR:
nsy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104218726
Membrane trafficking [BR:
nsy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
104218726
Ubiquitin system [BR:
nsy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104218726
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
zf-RING_5
Zf_IFT144_1st
zf-HC5HC2H
FAR1_N
DUF7129
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
104218726
NCBI-ProteinID:
XP_009767589
UniProt:
A0A1U7W006
LinkDB
All DBs
Position
9:complement(24786541..24788850)
Genome browser
AA seq
343 aa
AA seq
DB search
MDGRGASRYWCHQCSRRVDPAMEVELKCPICQQGFVEEMGSETALENDLGGSDSDRALSL
WAPILLGMMSNPRRRRSRFRHHLEFDSDDDDDHTREGGETELDPELASIMNRRRRNSATI
LQLLQSIRAGMENADGENSRETVRDGEERVILVNPFNQTIIVQGSYDSDNNDRPIGSLGD
YFIGPGLDMLLQHLAENDPNRYGTPPAQKEAVEALPAVKIDETLQCSVCLEDFEIGTEAK
EMPCKHKFHSECILPWLELHSTCPVCRHQLPSDESKVENVTGNTNAAQSSDTRNENGRRF
PVSLPWPLSGLFTSGTQSSNGNSSSTTTSSSGNANSNAHMHDD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatggaagaggagcatcaagatattggtgtcatcagtgttcaaggagggtggacccc
gcaatggaggtggaattgaaatgtcccatttgtcaacaaggttttgttgaggaaatggga
tcagaaactgctcttgaaaatgatttgggagggtccgactctgatcgtgccctctcgcta
tgggcgccaatcttgttaggcatgatgagcaaccctcgtcgtcgtcgatccaggtttagg
catcatctcgaatttgatagtgatgatgatgatgatcatactcgtgaagggggagagact
gaacttgatcctgagctggcatctataatgaataggcggaggaggaactctgccactatt
ctccagctcttgcaaagtattcgagctggaatggagaatgctgacggtgaaaatagtagg
gagactgttagggatggtgaggagcgtgtgatacttgtaaatccgttcaatcaaaccatc
attgtgcagggttcttatgattcggataataatgaccgacccattggctcattgggtgat
tatttcattggtcctggtttagacatgttgctgcaacatttggcagagaatgatccgaat
aggtatggtactccaccagctcaaaaagaggctgtagaggcgttgcctgcggtgaaaatt
gacgagacactgcagtgttccgtgtgtttggaagactttgagattgggactgaagccaaa
gagatgccttgtaagcacaagtttcacagcgagtgtatcttaccgtggctggagcttcat
agcacctgtccagtctgtaggcaccagttgccctctgatgaatcaaaagttgagaatgtc
actggtaacacaaatgctgctcagagtagtgatacaaggaatgaaaacggtcgacgtttt
ccagtgtcgcttccatggcctttgagtggtttgtttacatcaggtacccaatctagtaat
ggaaattcatcatcaacgactacttcttcatcaggaaatgcaaactcaaatgctcatatg
catgatgattag
DBGET
integrated database retrieval system
