Nicotiana sylvestris (wood tobacco): 104218735
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Entry
104218735 CDS
T05026
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsy03009
]
104218735
03036 Chromosome and associated proteins [BR:
nsy03036
]
104218735
Enzymes [BR:
nsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104218735
Ribosome biogenesis [BR:
nsy03009
]
Eukaryotic type
Pre-60S particles
Helicases
104218735
Chromosome and associated proteins [BR:
nsy03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
104218735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
PTPlike_phytase
Cas3-like_C_2
FlpD
Presenilin
Motif
Other DBs
NCBI-GeneID:
104218735
NCBI-ProteinID:
XP_009767597
UniProt:
A0A1U7VHP2
LinkDB
All DBs
Position
5:93561224..93566596
Genome browser
AA seq
692 aa
AA seq
DB search
MPALAVTETMVSEVSQKKMKKTPKSPADTHDLETPADKKSKEKKSKKTKIDSGSDSEELK
KSKKKEKKRKALDFDDEEEQKSETSSEICEPIDEKNRKKNKNAKLEEEEVVVEKKVEDPN
VLSNFRISKPLREALNAKGIEALFPIQAMTFDDILDGSDLVGRARTGQGKTLAFVLPILE
SLTNGPTKALRKTGYGKAPSVLVLLPTRELALQVFADFEVYGRAMGLTSCCLYGNSPMGA
QQVQLKRGVDIVVGTPGRIKDHIERGNLDFRSLKFRVLDEVDEMLKIGFVDDVELILGKV
EDASQVQTILFSATLPDWVKHIASKFLKPDKKTVDLVGNEKMKASKNVRHIIIPCSSSAR
SQLIPDIIRCYSSGGRTIIFTETRGYASELAGLLPGASALHGEIQQSQREVTLKGFRSGK
FMTLVATNVAARGLDIDNVQLIIQCEATSDVEAYIHRSGRTGRAGNTGVAVLLYDPRKSN
ISRIERESGVKFEHLSAPQPADVAKAAGKEAADIIAEISDSVIPAFKAAAEELLNTSDLS
PAELLAKALAKAAGYSEIKTRSLLTSMENCVTLLLECGRPIFSPSFVYSVLRRFLPGEKV
ESINGLTLTADGKGAVFDVSAEDLDQFLAGQKTAHGVNLEVVEALPQLQEREKPRGGRFG
GGGRGGFSNRRGGGGFSGGRGGRGNGNFGRRW
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcacttgctgtaactgaaacaatggtctccgaagtatcccagaagaaaatgaag
aagacccccaaatctcccgccgacacccatgatttagaaactcctgctgataagaaaagc
aaagaaaaaaagtcgaaaaagaccaagattgattctgggtctgattcagaggagctgaag
aagagcaaaaagaaagagaaaaagcgaaaagctttggactttgatgatgaggaagagcag
aagagtgaaacgagctccgagatatgcgagccgatagatgagaagaataggaagaagaat
aagaacgctaaattggaggaggaagaagtggttgttgagaagaaagtggaggatcctaat
gtgttgtctaattttaggatttcaaagcctttaagagaggctttgaatgctaaaggaata
gaagcacttttccctattcaagctatgacttttgatgatattcttgatgggtcggatttg
gttggacgagctcgtactggtcagggtaaaacactggcatttgttttgcccatattagag
tccctaacaaatggtcctactaaagcattgcgaaaaacaggatatgggaaggctccaagt
gttctggtgcttttacctactagggaattggcacttcaggtgtttgcggactttgaagtt
tatggccgggctatggggctcacttcatgctgtttgtatggaaattctcccatgggagca
caacaggttcaactaaaaagaggagttgatattgtagttggtactcccggaagaattaag
gaccacattgaaaggggaaatcttgatttcaggtctttaaagtttcgtgttcttgatgaa
gtcgatgaaatgttaaaaattggttttgtagatgatgtcgaacttattttaggcaaggtt
gaagatgcaagccaagttcaaacaattcttttcagtgccactttgccagactgggtgaag
catattgcttctaagtttctgaaacctgataagaaaacggttgaccttgttggtaatgag
aaaatgaaggccagtaaaaatgtgaggcatattattattccatgctctagttctgcaaga
tctcagctgattcctgatatcattcggtgctacagcagtggaggccgcactataattttt
actgagacaagggggtatgcttcagagctagctggcttgttgcctggggcaagtgctttg
catggggagatacaacagtcacagcgtgaggttacacttaaaggattcagatcaggaaaa
ttcatgacattagtggccacaaatgtggctgcccgtggattggatattgacaatgttcag
ttaatcatccagtgcgaagcgactagtgatgttgaagcatatattcatcgatctgggagg
acaggacgggcaggaaatactggtgttgctgtacttctgtatgatccaaggaagtccaac
atctctagaattgaaagagaatctggtgtgaagtttgagcatttgtctgctccacagcca
gctgatgttgctaaagcagctgggaaagaagctgctgatataattgctgaaatctccgat
agtgtcatacccgcatttaaggctgctgcggaggagcttctgaatacttccgacctatca
ccagcagagttgcttgcgaaagctcttgccaaggctgctgggtattctgagatcaagact
cggtcgcttcttacttctatggagaactgtgttactctgcttcttgagtgtgggaggccc
atattctcaccttcctttgtctatagtgtcttgaggaggttcctacctggggagaaggtt
gaatcaatcaacggtcttactttgacggccgatggaaagggggcagtttttgatgtatct
gctgaggacttggaccaatttcttgcaggccaaaaaactgcacatggcgtaaatttagag
gtagtggaagcgttgcctcagttgcaagagagagagaagccaagaggtggaagatttgga
ggtggtggtcgtggtggcttctctaacagaagaggcggaggtggcttttctggaggaaga
gggggaagaggtaatggtaactttggtcgcagatggtaa
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