KEGG   Nicotiana sylvestris (wood tobacco): 104219221
Entry
104219221         CDS       T05026                                 
Name
(RefSeq) protein RAE1
  KO
K14298  mRNA export factor
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104219221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104219221
   03036 Chromosome and associated proteins [BR:nsy03036]
    104219221
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     104219221
Chromosome and associated proteins [BR:nsy03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    104219221
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 104219221
NCBI-ProteinID: XP_009768164
UniProt: A0A1U7W0J7
LinkDB
Position
7:91849592..91857124
AA seq 347 aa
MSIFGAAAAANTNPNKSTEVQQPPSDSVSSLCFSPKANFLIATSWDNQVRCWEVMGSGTN
VGTAPKASISHEQPVLCSAWKDDGTTVFSGGCDKQVKMWPLGGQAVTVGMHDAPVKDLAW
IPEMSLLVTGSWDKTLRYWDLRQPNPAHVQQLPERCYALTVKHPLMVAGTADRNLVVFNL
QNPQTEFKRITSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRE
GNEIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNHDGSI
YAYAVCYDWSKGAENHNPSTAKTYIYLHFPQESEVKGKPRIGTSGRK
NT seq 1044 nt   +upstreamnt  +downstreamnt
atgtcgatattcggtgccgctgctgcggcaaacacgaatccgaataagtctaccgaggtt
caacaacctcctagcgattctgtatcaagcctgtgcttcagtcccaaggctaattttctg
attgctacttcatgggataaccaggtgcgatgctgggaagtaatgggaagtggaaccaac
gttggaaccgcacccaaggcctctatatcacatgagcaaccggttttatgctcagcttgg
aaggatgatggaacgactgtcttctctggaggttgtgacaagcaagtgaaaatgtggcca
ctaggtggtcaagctgtaacagtaggcatgcatgatgctccagtcaaggacttggcttgg
atcccagagatgagtctcttggtcacaggaagctgggataagactctgaggtactgggat
ttgagacagccaaatccagcacatgtccaacaacttcctgagcgctgctatgcacttacg
gtgaaacatcctctgatggttgctggcacggctgatagaaatcttgtagttttcaatctg
cagaatcctcagactgagttcaagaggattacctctcccttaaagtatcagactcggtgt
ttagctgcctttcctgatcaacaaggtttcttggttggctcaattgaaggacgggttggt
gtgcatcatcttgatgattcacaacaaagtaaaaatttcacattcaagtgccacagggag
ggcaatgaaatttactctgtcaactctctgaacttccatcctgttcatggaacatttgca
actgcgggatctgatggcgccttcaacttttgggacaaagacagcaagcagaggcttaag
gcaatgtcaagatgcagccagcctataccttgcagcgctttcaaccatgatggctcaata
tatgcatatgcggtttgttatgattggagtaagggtgcagaaaatcataatccatcaacc
gcaaaaacatacatttacttgcacttcccacaggagtctgaggttaaaggcaagcctcga
attgggactagcggtagaaagtga

DBGET integrated database retrieval system