Nicotiana sylvestris (wood tobacco): 104219334
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Entry
104219334 CDS
T05026
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy00040
Pentose and glucuronate interconversions
nsy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104219334
Enzymes [BR:
nsy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104219334
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104219334
NCBI-ProteinID:
XP_009768302
UniProt:
A0A1U7VJR2
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Position
5:31282772..31287365
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AA seq
494 aa
AA seq
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MLSNTCILFFFFFLISLSPVIIATFNRTLPYQHPFPEAVVQEVKRRVNESVARRQILDTT
VTNFQCFTGNPIDDCWKCDPNWANNRQHLADCAIGFGHGAVGGKGGRYYLVSDPSDLDTV
NPTPGTLRHAVIQDEPLWITFAGDMIITLKHELMINNYKTIDGRGANVHVTGGGCITLQY
VSNVIIHNIHIYNCVPSGNSNIRQSQTEVGWRGMSDGDGISIYSSRNIWIDHCALSHCTD
GLIDAIMGSTAITISNSYFTHHDKVMLLGHDDRYLPDFGMQVTIAFNHFGQGLVQRMPRC
RRGYIHVVNNDFTEWQMYAIGGSASPTINSQGNRFTAPEDPNAKEVTKRVDTNEKDWTQW
NWRTEGDEMVNGAYFVPSGDGLSNQYALASSMEPKSAFLIDQLTMNAGVLGVPRDTSVAM
SYGGRTRTTVGTNQGGGARSNDGDGDFLEKVFGSVAAAGSSSPPSTTTILLSLLILYVTT
NNGGLLTLPLILLL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctttctaatacttgcattctctttttcttcttcttcttaatctccttatctcctgtt
attatagctacctttaatcgtactcttccttatcaacacccctttcctgaagctgttgtt
caagaagtaaagaggagggtgaatgaatccgttgcaagaagacaaatactcgataccaca
gtaacaaatttccaatgttttacaggcaatccaatagacgattgctggaagtgcgaccca
aactgggccaacaaccgccagcatctcgccgattgtgccattgggttcggtcacggtgca
gtcggaggaaaaggcggtcggtattacctagtctccgatccctccgacttagacaccgtg
aacccaaccccaggaactctccggcatgcggtgatccaagacgaacctctgtggatcacc
tttgccggagacatgatcataacactaaaacatgaactcatgataaataattacaaaacc
atcgacggccgcggagctaacgtgcatgttacagggggtggatgtataacgttacaatat
gtatcaaatgtgatcatacataatatacatatatacaattgtgttccatctggaaatagt
aatataaggcaaagtcaaactgaagttggatggagaggcatgtcagatggtgatggaatt
tccatatatagctcgaggaatatttggattgatcattgtgctttgtctcattgtactgat
ggcttaattgatgctattatgggatctactgctattactatatctaatagctatttcact
caccatgataaagttatgcttttgggacacgatgatcgttacttgcctgatttcggcatg
caggtgacaatagcttttaatcattttggacaagggctggtacagagaatgccaaggtgt
agaagagggtatatacatgtagtcaacaacgattttacagaatggcaaatgtatgcaatt
ggtggtagcgctagtcccaccattaacagtcagggcaaccgttttactgcacctgaggac
cctaatgccaaggaggtgacgaagcgagttgacacaaacgagaaagattggactcagtgg
aactggaggacggaaggggatgaaatggtaaatggagcatactttgttccttcaggcgat
ggacttagtaaccaatatgcattggcatcaagtatggagcctaaatctgcttttctcatt
gatcaactcaccatgaatgctggtgtccttggtgttcccagggataccagtgtggccatg
tcatatggtgggagaaccagaaccaccgtcggaaccaaccagggtggcggagctaggtct
aacgacggtgatggcgacttcttagaaaaggtatttgggagcgttgcagcggcaggatca
tcatcaccaccttcaaccacaactatcctgttgtctcttctaattttgtatgttaccacc
aacaatggtggcctattgacattgccattaatactattactatag
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